RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 ADAT1Q9BUB4 502 aaKnown RBP7.25□□□□□ -1.25
NUP54-211ENST00000512151 ABHD6Q9BV23 337 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 TTTY10Q9BZA0 68 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 FGF20Q9NP95 211 aaPredicted RBP7.25□□□□□ -1.25
NUP54-211ENST00000512151 FKBP14Q9NWM8 211 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 PSORS1C1Q9UIG5 152 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.25□□□□□ -1.25
NUP54-211ENST00000512151 RPL36Q9Y3U8 105 aaKnown RBP7.25□□□□□ -1.25
NUP54-211ENST00000512151 SNX5Q9Y5X3 404 aa7.25□□□□□ -1.25
NUP54-211ENST00000512151 SORL1Q92673 2214 aa7.24□□□□□ -1.25
NUP54-211ENST00000512151 A0A1W2PQ09 198 aa7.24□□□□□ -1.25
NUP54-211ENST00000512151 H3BMQ9 156 aa7.24□□□□□ -1.25
NUP54-211ENST00000512151 ALDOBP05062 364 aa7.24□□□□□ -1.25
NUP54-211ENST00000512151 ALOX5APP20292 161 aa7.24□□□□□ -1.25
NUP54-211ENST00000512151 COX7A1P24310 79 aa7.24□□□□□ -1.25
NUP54-211ENST00000512151 CEBPDP49716 269 aaPredicted RBP7.24□□□□□ -1.25
NUP54-211ENST00000512151 EIF2B1Q14232 305 aaKnown RBP7.24□□□□□ -1.25
NUP54-211ENST00000512151 DGUOKQ16854 277 aa7.24□□□□□ -1.25
NUP54-211ENST00000512151 MICBQ29980 383 aa7.24□□□□□ -1.25
NUP54-211ENST00000512151 LRRC10Q5BKY1 277 aa7.24□□□□□ -1.25
NUP54-211ENST00000512151 GPR107Q5VW38 600 aa7.24□□□□□ -1.25
NUP54-211ENST00000512151 KCTD18Q6PI47 426 aaPredicted RBP7.24□□□□□ -1.25
NUP54-211ENST00000512151 SLC36A1Q7Z2H8 476 aa7.24□□□□□ -1.25
NUP54-211ENST00000512151 NAA40Q86UY6 237 aa7.24□□□□□ -1.25
NUP54-211ENST00000512151 OR4X2Q8NGF9 303 aa7.24□□□□□ -1.25
NUP54-211ENST00000512151 THEM6Q8WUY1 208 aa7.24□□□□□ -1.25
NUP54-211ENST00000512151 DDB2Q92466 427 aa7.24□□□□□ -1.25
NUP54-211ENST00000512151 SLAMF6Q96DU3 332 aa7.24□□□□□ -1.25
NUP54-211ENST00000512151 GAFA1Q96PS6 74 aa7.24□□□□□ -1.25
NUP54-211ENST00000512151 CNN2Q99439 309 aaKnown RBP7.24□□□□□ -1.25
NUP54-211ENST00000512151 WACQ9BTA9 647 aa7.24□□□□□ -1.25
NUP54-211ENST00000512151 SCN3BQ9NY72 215 aa7.24□□□□□ -1.25
NUP54-211ENST00000512151 SMAD5-AS1Q9Y6J3 95 aa7.24□□□□□ -1.25
NUP54-211ENST00000512151 A0A1W2PQL4 384 aaPredicted RBP7.23□□□□□ -1.25
NUP54-211ENST00000512151 SH2D7A6NKC9 451 aaPredicted RBP7.23□□□□□ -1.25
NUP54-211ENST00000512151 CD300LBA8K4G0 201 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 PTGES3LE9PB15 166 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 PSMD9O00233 223 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 NOL3O60936 208 aaKnown RBP7.23□□□□□ -1.25
NUP54-211ENST00000512151 IGHA1P01876 353 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 OR2T7P0C7T2 308 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 FRMD6-AS1P0C7T7 363 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 LIMS3P0CW19 117 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 LIMS4P0CW20 117 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 MUC1P15941 1255 aaPredicted RBP7.23□□□□□ -1.25
NUP54-211ENST00000512151 C21orf33P30042 268 aaPredicted RBP7.23□□□□□ -1.25
NUP54-211ENST00000512151 MYCNOSP40205 109 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 ETV1P50549 477 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 RPL23AP62750 156 aaKnown RBP7.23□□□□□ -1.25
NUP54-211ENST00000512151 RAB40BQ12829 278 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 ECH1Q13011 328 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 KRTAP27-1Q3LI81 207 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 ZNF684Q5T5D7 378 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 ATPAF1Q5TC12 328 aaPredicted RBP7.23□□□□□ -1.25
NUP54-211ENST00000512151 STUMQ69YW2 141 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 AHSA2Q719I0 299 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 LHFPL3Q86UP9 236 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 SVOPQ8N4V2 548 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 C11orf42Q8N5U0 333 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 GJC3Q8NFK1 279 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 OR10H4Q8NGA5 316 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 OR51D1Q8NGF3 324 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 OR52H1Q8NGJ2 320 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 OR5D13Q8NGL4 314 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 OR2AJ1Q8NGZ0 328 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 OR2T27Q8NH04 317 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 RPS4Y2Q8TD47 263 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 RAB2BQ8WUD1 216 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 SPRYD4Q8WW59 207 aaPredicted RBP7.23□□□□□ -1.25
NUP54-211ENST00000512151 BCL7BQ9BQE9 202 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 SNTG1Q9NSN8 517 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 CENPMQ9NSP4 180 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 CLEC2DQ9UHP7 191 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 POLR1DQ9Y2S0 133 aa7.23□□□□□ -1.25
NUP54-211ENST00000512151 SNTNA6NMZ2 147 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 ZNF670-ZNF695F2Z2N8 137 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 RGS10O43665 173 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 GMDSO60547 372 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 RHBDL1O75783 438 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 CDK1P06493 297 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 LPLP06858 475 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 ACSM4P0C7M7 580 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 PIPP12273 146 aaPredicted RBP7.22□□□□□ -1.25
NUP54-211ENST00000512151 NDUFB7P17568 137 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 ATP6V1E1P36543 226 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 VEGFCP49767 419 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 GP2P55259 537 aaKnown RBP7.22□□□□□ -1.25
NUP54-211ENST00000512151 GMFBP60983 142 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 ST3GAL4Q11206 333 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 SYT6Q5T7P8 510 aaPredicted RBP7.22□□□□□ -1.25
NUP54-211ENST00000512151 WDR82Q6UXN9 313 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 PLEKHG7Q6ZR37 379 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 PRSS48Q7RTY5 328 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 OR2W3Q7Z3T1 314 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 ANKRD13BQ86YJ7 626 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 RNF133Q8WVZ7 376 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 TMEM80Q96HE8 168 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 RAX2Q96IS3 184 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 OR8B4Q96RC9 309 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 TM2D3Q9BRN9 247 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms