RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 SULT4A1Q9BR01 284 aa7.94□□□□□ -1.14
HTT-205ENST00000509043 ZNF2Q9BSG1 426 aaPredicted RBP7.94□□□□□ -1.14
HTT-205ENST00000509043 RTBDNQ9BSG5 229 aaPredicted RBP7.94□□□□□ -1.14
HTT-205ENST00000509043 DPCDQ9BVM2 203 aaPredicted RBP7.94□□□□□ -1.14
HTT-205ENST00000509043 GSX2Q9BZM3 304 aa7.94□□□□□ -1.14
HTT-205ENST00000509043 ZNF442Q9H7R0 627 aa7.94□□□□□ -1.14
HTT-205ENST00000509043 ZFP57Q9NU63 452 aa7.94□□□□□ -1.14
HTT-205ENST00000509043 C1orf123Q9NWV4 160 aa7.94□□□□□ -1.14
HTT-205ENST00000509043 DUX4Q9UBX2 424 aa7.94□□□□□ -1.14
HTT-205ENST00000509043 KCNIP3Q9Y2W7 256 aa7.94□□□□□ -1.14
HTT-205ENST00000509043 AMDHD2Q9Y303 409 aa7.94□□□□□ -1.14
HTT-205ENST00000509043 CSAG2Q9Y5P2 127 aa7.94□□□□□ -1.14
HTT-205ENST00000509043 MYO15AQ9UKN7 3530 aa7.94□□□□□ -1.14
HTT-205ENST00000509043 VPS13AQ96RL7 3174 aa7.94□□□□□ -1.14
HTT-205ENST00000509043 TRBV6-7A0A0A0MS04 114 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 TRAV14DV4A0A0A6YYC5 116 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 LRP5LA4QPB2 252 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 SMPD2O60906 423 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 WDR1O75083 606 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 OR7C1O76099 320 aaPredicted RBP7.93□□□□□ -1.14
HTT-205ENST00000509043 MPC2O95563 127 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 NGFP01138 241 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 IGKV3-15P01624 115 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 PSMB6P28072 239 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 SSTR2P30874 369 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 RBMXP38159 391 aaKnown RBP7.93□□□□□ -1.14
HTT-205ENST00000509043 MDH2P40926 338 aaKnown RBP7.93□□□□□ -1.14
HTT-205ENST00000509043 KIR2DL2P43627 348 aaPredicted RBP7.93□□□□□ -1.14
HTT-205ENST00000509043 GPM6AP51674 278 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 PPP1CBP62140 327 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 UBA52P62987 128 aaKnown RBP7.93□□□□□ -1.14
HTT-205ENST00000509043 SRPXP78539 464 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 MZT1Q08AG7 82 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 SRSF6Q13247 344 aaKnown RBP7.93□□□□□ -1.14
HTT-205ENST00000509043 EXOSC2Q13868 293 aaKnown RBP7.93□□□□□ -1.14
HTT-205ENST00000509043 HLXQ14774 488 aaPredicted RBP7.93□□□□□ -1.14
HTT-205ENST00000509043 C3orf36Q3SXR2 165 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 KRTCAP3Q53RY4 240 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 ESCO2Q56NI9 601 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 FAM76BQ5HYJ3 339 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 DMRTC1Q5HYR2 192 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 C17orf107Q6ZR85 190 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 BEND4Q6ZU67 534 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 ACOT7LQ6ZUV0 252 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 RTN4RL2Q86UN3 420 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 SLC38A6Q8IZM9 456 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 KCNRGQ8N5I3 272 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 CCDC71LQ8N9Z2 235 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 SPERTQ8NA61 448 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 SNIP1Q8TAD8 396 aaKnown RBP7.93□□□□□ -1.14
HTT-205ENST00000509043 CASTOR1Q8WTX7 329 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 TMEM230Q96A57 120 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 MARVELD3Q96A59 401 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 PHYHIPLQ96FC7 376 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 WDR89Q96FK6 387 aaPredicted RBP7.93□□□□□ -1.14
HTT-205ENST00000509043 GALNT14Q96FL9 552 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 SUCNR1Q9BXA5 334 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 ARL6Q9H0F7 186 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 OR51I2Q9H344 312 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 CHMP1AQ9HD42 196 aaPredicted RBP7.93□□□□□ -1.14
HTT-205ENST00000509043 MED9Q9NWA0 146 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 TREM2Q9NZC2 230 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 ZNF230Q9UIE0 474 aaPredicted RBP7.93□□□□□ -1.14
HTT-205ENST00000509043 TNFSF18Q9UNG2 199 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 PROCRQ9UNN8 238 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 AUP1Q9Y679 476 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 PTPRBP23467 1997 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 MED13Q9UHV7 2174 aa7.93□□□□□ -1.14
HTT-205ENST00000509043 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.92□□□□□ -1.14
HTT-205ENST00000509043 KANTRA0A1W2PQU2 76 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 C5orf51A6NDU8 294 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 CRYM-AS1A6NIL9 109 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 IQCF6A8MYZ5 107 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 SDCBPO00560 298 aaPredicted RBP7.92□□□□□ -1.14
HTT-205ENST00000509043 DIRAS3O95661 229 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 NAPSAO96009 420 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 IFNA21P01568 189 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 ZNF728P0DKX0 622 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 LYL1P12980 280 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 CCL2P13500 99 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 RPS2P15880 293 aaKnown RBP7.92□□□□□ -1.14
HTT-205ENST00000509043 BCL3P20749 454 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 NUP62P37198 522 aaPredicted RBP7.92□□□□□ -1.14
HTT-205ENST00000509043 RSPO4Q2I0M5 234 aaPredicted RBP7.92□□□□□ -1.14
HTT-205ENST00000509043 ABCA11PQ4W5N1 156 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 SHEQ5VZ18 495 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 KCTD9Q7L273 389 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 MOB1BQ7L9L4 216 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 OR8H3Q8N146 312 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 LRTM2Q8N967 370 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 CNEP1R1Q8N9A8 125 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 C9orf106Q8NAJ2 232 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 INO80EQ8NBZ0 244 aaPredicted RBP7.92□□□□□ -1.14
HTT-205ENST00000509043 SCARB1Q8WTV0 552 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 PPP1R1CQ8WVI7 109 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 EXTL1Q92935 676 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 SLAMF9Q96A28 289 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 MOB3AQ96BX8 217 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 C2orf50Q96LR7 162 aa7.92□□□□□ -1.14
HTT-205ENST00000509043 LRFN3Q9BTN0 628 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms