RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 CCDC183Q5T5S1 534 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 BRD3OSQ6XYD6 125 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 CCDC80Q76M96 950 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 SNX20Q7Z614 316 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 WDR86Q86TI4 376 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 PSTKQ8IV42 348 aaKnown RBP2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 STPG2Q8N412 459 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 FNDC5Q8NAU1 212 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 OR52H1Q8NGJ2 320 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 KCTD4Q8WVF5 259 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 RERGQ96A58 199 aaPredicted RBP2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 RILPQ96NA2 401 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 OLFM3Q96PB7 478 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 TSSK3Q96PN8 268 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 GSDMAQ96QA5 445 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 SLC39A3Q9BRY0 314 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 OR8D2Q9GZM6 311 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 NHEJ1Q9H9Q4 299 aaPredicted RBP2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 RNF122Q9H9V4 155 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 ANKHQ9HCJ1 492 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 MRPS30Q9NP92 439 aaKnown RBP2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 CBLN4Q9NTU7 201 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 CHRNA9Q9UGM1 479 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 TMCO1Q9UM00 188 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 POLDIP2Q9Y2S7 368 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 TIMM10BQ9Y5J6 103 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 DNAH11Q96DT5 4516 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 VPS13DQ5THJ4 4388 aa2.37□□□□□ -2.03
TOPBP1-206ENST00000508524 KCNE1BA0A087WTH5 132 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 HSD17B6O14756 317 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 ATP5LO75964 103 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 CLPSP04118 112 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 CRHP06850 196 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 RALBP11234 206 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 LAP3P28838 519 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 FOXN2P32314 431 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 SOX6P35712 828 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 RAB8AP61006 207 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 RAP1AP62834 184 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 RELAQ04206 551 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 TAF1AQ15573 450 aaPredicted RBP2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 HSP90AA4PQ58FG1 418 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 OPN5Q6U736 354 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 NTM-AS1Q6ZSK4 140 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 TAS2R42Q7RTR8 314 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 LRP11Q86VZ4 500 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 RIMKLAQ8IXN7 391 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 GABRG1Q8N1C3 465 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 CA13Q8N1Q1 262 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 ZCCHC24Q8N2G6 241 aaKnown RBP2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 MUC15Q8N387 334 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 CTNNBL1Q8WYA6 563 aaPredicted RBP2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 TMIGD2Q96BF3 282 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 COL21A1Q96P44 957 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 SUCNR1Q9BXA5 334 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 GABARAPL3Q9BY60 117 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 FN3KRPQ9HA64 309 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 RAB18Q9NP72 206 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 RPH3ALQ9UNE2 315 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 SLC22A7Q9Y694 548 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 TMEM14AQ9Y6G1 99 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 IKBKGQ9Y6K9 419 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 DNAH2Q9P225 4427 aa2.36□□□□□ -2.03
TOPBP1-206ENST00000508524 IGKV1D-13A0A0B4J2D9 117 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 GOLGA8QA0A0J9YX86 632 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 MDFIC2A0A1B0GVS7 189 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 GOLGA8OA6NCC3 632 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 CCDC182A6NF36 153 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 B4DSR2 109 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 GOLGA8NF8WBI6 632 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 C3orf84H3BNL1 204 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 GOLGA8RI6L899 631 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 NDUFS8O00217 210 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 TXNDC9O14530 226 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 FTH1P02794 183 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 MSMBP08118 114 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 IGHV1-8P0DP01 117 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 IGKV1-13P0DP09 117 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 RPA3P35244 121 aaPredicted RBP2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 ERVK-25P63136 954 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 MEF2BQ02080 365 aaPredicted RBP2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 AQP6Q13520 282 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 PON3Q15166 354 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 SLC9A3R2Q15599 337 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 TAF9Q16594 264 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 DMRTC1Q5HYR2 192 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 CCDC122Q5T0U0 273 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 TRIM40Q6P9F5 258 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 ANGPTL8Q6UXH0 198 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 MBOAT1Q6ZNC8 495 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 CCDC50Q8IVM0 306 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 ZNF567Q8N184 647 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 OR5M1Q8NGP8 315 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 CLDND2Q8NHS1 167 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 UBE2E3Q969T4 207 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 RAD51AP1Q96B01 352 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 DHRS9Q9BPW9 319 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 CCDC77Q9BR77 488 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 RACGAP1Q9H0H5 632 aa2.35□□□□□ -2.03
TOPBP1-206ENST00000508524 VPS37BQ9H9H4 285 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms