RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 CD177Q8N6Q3 437 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 GAFA1Q96PS6 74 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 GSX1Q9H4S2 264 aaPredicted RBP9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 CNTD2Q9H8S5 307 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 PCDHB16Q9NRJ7 776 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 IL36GQ9NZH8 169 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 CLN8Q9UBY8 286 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 SSR3Q9UNL2 185 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 NSD1Q96L73 2696 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 DVL1O14640 695 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 PHF1O43189 567 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 NDUFB3O43676 98 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 FCN3O75636 299 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 CDRT1O95170 752 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 CHRM2P08172 466 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 ZNF16P17020 682 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 PRKACAP17612 351 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 ZFP36P26651 326 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 GABRA2P47869 451 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 PSMD7P51665 324 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 FGF12P61328 243 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 LCN2P80188 198 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 GPR176Q14439 515 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 RSU1Q15404 277 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 SPIN3Q5JUX0 258 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 C22orf42Q6IC83 251 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 GLCCI1Q86VQ1 547 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 ZNF561Q8N587 486 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 FAM216BQ8N7L0 139 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 OR4D6Q8NGJ1 314 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 TMEM186Q96B77 213 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 YIPF6Q96EC8 236 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 S100A13Q99584 98 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 NKX3-1Q99801 234 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 MRPS26Q9BYN8 205 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 FAM192AQ9GZU8 254 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 METTL9Q9H1A3 318 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 OR51E2Q9H255 320 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 ELL3Q9HB65 397 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 LPAR2Q9HBW0 351 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 TXNL4BQ9NX01 149 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 ING4Q9UNL4 249 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 GSTK1Q9Y2Q3 226 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 MRPS28Q9Y2Q9 187 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 MAB21L2Q9Y586 359 aa9.89□□□□□ -0.83
PDLIM5-208ENST00000504489 A0A1B0GW55 424 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 ZNF780AO75290 641 aaPredicted RBP9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 ECDO95905 644 aaPredicted RBP9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 TFF1P04155 84 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 DUX4L2P0CJ85 424 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 DUX4L3P0CJ86 424 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 DUX4L4P0CJ87 422 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 DUX4L5P0CJ88 424 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 DUX4L6P0CJ89 424 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 DUX4L7P0CJ90 424 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 GADD45AP24522 165 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 MYL9P24844 172 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 CAV3P56539 151 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 PAX2Q02962 417 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 DGUOKQ16854 277 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 TIMM50Q3ZCQ8 353 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 LRRC10Q5BKY1 277 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 CD276Q5ZPR3 534 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 DUX4L9Q6RFH8 374 aaPredicted RBP9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 GDPGP1Q6ZNW5 385 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 OR51T1Q8NGJ9 327 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 TBC1D15Q8TC07 691 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 C1orf147Q96MC9 270 aaPredicted RBP9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 GFI1Q99684 422 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 EXOSC4Q9NPD3 245 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 HIF1ANQ9NWT6 349 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 IL36RNQ9UBH0 155 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 GHRLQ9UBU3 117 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 DUX4Q9UBX2 424 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 OR14J1Q9UGF5 321 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 GLS2Q9UI32 602 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 AK6Q9Y3D8 172 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 MTORP42345 2549 aa9.88□□□□□ -0.83
PDLIM5-208ENST00000504489 NAV3Q8IVL0 2385 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 LOC105371242A0A075B767 164 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 SHISA3A0PJX4 238 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 A8MV72 311 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 K7N7A8 449 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 SLC17A2O00624 439 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 PDCD5O14737 125 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 SH2D1BO14796 132 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 SLC22A1O15245 554 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 HTR3BO95264 441 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 HAND1O96004 215 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 CSTBP04080 98 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 UBBP0CG47 229 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 CALCBP10092 127 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 SELLP14151 372 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 GATA3P23771 443 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 LMO1P25800 156 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 RANBP1P43487 201 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 CEBPDP49716 269 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 COL10A1Q03692 680 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 IKZF1Q13422 519 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 IL13RA2Q14627 380 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms