RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 CRLF1O75462 422 aa16.09■□□□□ 0.17
HDAC4-212ENST00000495497 NDUFB7P17568 137 aa16.09■□□□□ 0.17
HDAC4-212ENST00000495497 SRMP19623 302 aa16.09■□□□□ 0.17
HDAC4-212ENST00000495497 PSMA1P25786 263 aaKnown RBP16.09■□□□□ 0.17
HDAC4-212ENST00000495497 CAPZA1P52907 286 aa16.09■□□□□ 0.17
HDAC4-212ENST00000495497 PDCD1Q15116 288 aa16.09■□□□□ 0.17
HDAC4-212ENST00000495497 CD276Q5ZPR3 534 aa16.09■□□□□ 0.17
HDAC4-212ENST00000495497 PXT1Q8NFP0 134 aa16.09■□□□□ 0.17
HDAC4-212ENST00000495497 TSPAN14Q8NG11 270 aa16.09■□□□□ 0.17
HDAC4-212ENST00000495497 H1FXQ92522 213 aaKnown RBP16.09■□□□□ 0.17
HDAC4-212ENST00000495497 MUL1Q969V5 352 aa16.09■□□□□ 0.17
HDAC4-212ENST00000495497 BEX2Q9BXY8 128 aa16.09■□□□□ 0.17
HDAC4-212ENST00000495497 CNTD2Q9H8S5 307 aa16.09■□□□□ 0.17
HDAC4-212ENST00000495497 OPN4Q9UHM6 478 aa16.09■□□□□ 0.17
HDAC4-212ENST00000495497 KIR2DS1A0A191URI9 304 aa16.08■□□□□ 0.16
HDAC4-212ENST00000495497 HAND1O96004 215 aa16.08■□□□□ 0.16
HDAC4-212ENST00000495497 RSU1Q15404 277 aa16.08■□□□□ 0.16
HDAC4-212ENST00000495497 ASCL4Q6XD76 172 aa16.08■□□□□ 0.16
HDAC4-212ENST00000495497 LYPD6Q86Y78 171 aa16.08■□□□□ 0.16
HDAC4-212ENST00000495497 PNLDC1Q8NA58 520 aaKnown RBP16.08■□□□□ 0.16
HDAC4-212ENST00000495497 NR1H4Q96RI1 486 aaPredicted RBP16.08■□□□□ 0.16
HDAC4-212ENST00000495497 SONP18583 2426 aaKnown RBP16.08■□□□□ 0.16
HDAC4-212ENST00000495497 HTR3BO95264 441 aa16.07■□□□□ 0.16
HDAC4-212ENST00000495497 CHRM2P08172 466 aa16.07■□□□□ 0.16
HDAC4-212ENST00000495497 GATA3P23771 443 aa16.07■□□□□ 0.16
HDAC4-212ENST00000495497 PAX8Q06710 450 aa16.07■□□□□ 0.16
HDAC4-212ENST00000495497 ZNF146Q15072 292 aa16.07■□□□□ 0.16
HDAC4-212ENST00000495497 CHRFAM7AQ494W8 412 aa16.07■□□□□ 0.16
HDAC4-212ENST00000495497 FIP1L1Q6UN15 594 aaKnown RBP16.07■□□□□ 0.16
HDAC4-212ENST00000495497 BTNL3Q6UXE8 466 aa16.07■□□□□ 0.16
HDAC4-212ENST00000495497 ZNF561Q8N587 486 aa16.07■□□□□ 0.16
HDAC4-212ENST00000495497 ASCC1Q8N9N2 400 aaKnown RBP16.07■□□□□ 0.16
HDAC4-212ENST00000495497 OR4D6Q8NGJ1 314 aa16.07■□□□□ 0.16
HDAC4-212ENST00000495497 DCTN5Q9BTE1 182 aa16.07■□□□□ 0.16
HDAC4-212ENST00000495497 METTL9Q9H1A3 318 aa16.07■□□□□ 0.16
HDAC4-212ENST00000495497 ZNF696Q9H7X3 374 aa16.07■□□□□ 0.16
HDAC4-212ENST00000495497 RPUSD1Q9UJJ7 312 aaKnown RBP16.07■□□□□ 0.16
HDAC4-212ENST00000495497 CDC42EP3Q9UKI2 254 aa16.07■□□□□ 0.16
HDAC4-212ENST00000495497 AUP1Q9Y679 476 aa16.07■□□□□ 0.16
HDAC4-212ENST00000495497 A0A087WXM4 84 aa16.06■□□□□ 0.16
HDAC4-212ENST00000495497 A0A1W2PP11 408 aa16.06■□□□□ 0.16
HDAC4-212ENST00000495497 TMEM82A0PJX8 343 aa16.06■□□□□ 0.16
HDAC4-212ENST00000495497 J3QLI3 93 aa16.06■□□□□ 0.16
HDAC4-212ENST00000495497 SIRPB1O00241 398 aa16.06■□□□□ 0.16
HDAC4-212ENST00000495497 ENSAO43768 121 aaKnown RBP16.06■□□□□ 0.16
HDAC4-212ENST00000495497 HOXB4P17483 251 aaPredicted RBP16.06■□□□□ 0.16
HDAC4-212ENST00000495497 CALRP27797 417 aaKnown RBP16.06■□□□□ 0.16
HDAC4-212ENST00000495497 MTNR1BP49286 362 aa16.06■□□□□ 0.16
HDAC4-212ENST00000495497 CAV3P56539 151 aa16.06■□□□□ 0.16
HDAC4-212ENST00000495497 SCN1BQ07699 218 aa16.06■□□□□ 0.16
HDAC4-212ENST00000495497 SPIN3Q5JUX0 258 aa16.06■□□□□ 0.16
HDAC4-212ENST00000495497 SYT6Q5T7P8 510 aaPredicted RBP16.06■□□□□ 0.16
HDAC4-212ENST00000495497 GLIPR1L1Q6UWM5 242 aa16.06■□□□□ 0.16
HDAC4-212ENST00000495497 PHYHIPQ92561 330 aa16.06■□□□□ 0.16
HDAC4-212ENST00000495497 S100A13Q99584 98 aa16.06■□□□□ 0.16
HDAC4-212ENST00000495497 GFI1Q99684 422 aa16.06■□□□□ 0.16
HDAC4-212ENST00000495497 EXOSC4Q9NPD3 245 aaKnown RBP16.06■□□□□ 0.16
HDAC4-212ENST00000495497 LPAR3Q9UBY5 353 aa16.06■□□□□ 0.16
HDAC4-212ENST00000495497 MRPS28Q9Y2Q9 187 aaKnown RBP16.06■□□□□ 0.16
HDAC4-212ENST00000495497 NSD1Q96L73 2696 aaPredicted RBP16.06■□□□□ 0.16
HDAC4-212ENST00000495497 TRDV1A0A1B0GX56 115 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 MEGF11A6BM72 1044 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 ZNF737O75373 536 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 ECDO95905 644 aaPredicted RBP16.05■□□□□ 0.16
HDAC4-212ENST00000495497 OR2H2O95918 312 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 TK1P04183 234 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 HNF1AP20823 631 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 SERPINA2P20848 420 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 FGF12P61328 243 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 PIGYQ3MUY2 71 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 SLC22A6Q4U2R8 563 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 ELP2Q6IA86 826 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 Q6P435 159 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 CD200R1LQ6Q8B3 271 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 METAP1DQ6UB28 335 aaPredicted RBP16.05■□□□□ 0.16
HDAC4-212ENST00000495497 C17orf107Q6ZR85 190 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 CDH26Q8IXH8 852 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 NKAIN3Q8N8D7 197 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 LY6G5BQ8NDX9 201 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 OR4M1Q8NGD0 313 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 MRI1Q9BV20 369 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 CHST6Q9GZX3 395 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 SLITRK2Q9H156 845 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 RHOFQ9HBH0 211 aa16.05■□□□□ 0.16
HDAC4-212ENST00000495497 AK6Q9Y3D8 172 aaKnown RBP16.05■□□□□ 0.16
HDAC4-212ENST00000495497 K7N7A8 449 aa16.04■□□□□ 0.16
HDAC4-212ENST00000495497 SH2D1BO14796 132 aa16.04■□□□□ 0.16
HDAC4-212ENST00000495497 GPR37O15354 613 aa16.04■□□□□ 0.16
HDAC4-212ENST00000495497 PSPNO60542 156 aa16.04■□□□□ 0.16
HDAC4-212ENST00000495497 ARL6IP5O75915 188 aa16.04■□□□□ 0.16
HDAC4-212ENST00000495497 PPIAL4GP0DN37 164 aa16.04■□□□□ 0.16
HDAC4-212ENST00000495497 GABRR1P24046 479 aa16.04■□□□□ 0.16
HDAC4-212ENST00000495497 SRP14P37108 136 aaKnown RBP16.04■□□□□ 0.16
HDAC4-212ENST00000495497 ARF6P62330 175 aa16.04■□□□□ 0.16
HDAC4-212ENST00000495497 GLT8D1Q68CQ7 371 aa16.04■□□□□ 0.16
HDAC4-212ENST00000495497 AWAT2Q6E213 333 aa16.04■□□□□ 0.16
HDAC4-212ENST00000495497 C22orf42Q6IC83 251 aa16.04■□□□□ 0.16
HDAC4-212ENST00000495497 Q8NFD4 153 aa16.04■□□□□ 0.16
HDAC4-212ENST00000495497 OR4S1Q8NGB4 309 aa16.04■□□□□ 0.16
HDAC4-212ENST00000495497 SNX22Q96L94 193 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms