RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 IDNKQ5T6J7 187 aa1.24□□□□□ -2.21
ITGB1-216ENST00000493758 MRPL21Q7Z2W9 205 aaKnown RBP1.24□□□□□ -2.21
ITGB1-216ENST00000493758 CYP4Z2PQ8N1L4 340 aa1.24□□□□□ -2.21
ITGB1-216ENST00000493758 OR6K6Q8NGW6 343 aa1.24□□□□□ -2.21
ITGB1-216ENST00000493758 YPEL4Q96NS1 127 aa1.24□□□□□ -2.21
ITGB1-216ENST00000493758 OR8B2Q96RD0 313 aa1.24□□□□□ -2.21
ITGB1-216ENST00000493758 SHCBP1LQ9BZQ2 653 aa1.24□□□□□ -2.21
ITGB1-216ENST00000493758 CFL2Q9Y281 166 aa1.24□□□□□ -2.21
ITGB1-216ENST00000493758 U3KQK5 164 aa1.24□□□□□ -2.21
ITGB1-216ENST00000493758 HMCN1Q96RW7 5635 aa1.24□□□□□ -2.21
ITGB1-216ENST00000493758 SETBP1Q9Y6X0 1596 aa1.24□□□□□ -2.21
ITGB1-216ENST00000493758 UNC80Q8N2C7 3258 aa1.24□□□□□ -2.21
ITGB1-216ENST00000493758 VCANP13611 3396 aa1.24□□□□□ -2.21
ITGB1-216ENST00000493758 SPTBN5Q9NRC6 3674 aaKnown RBP1.23□□□□□ -2.21
ITGB1-216ENST00000493758 IGKV1D-37A0A075B6S9 117 aa1.23□□□□□ -2.21
ITGB1-216ENST00000493758 CD300LBA8K4G0 201 aa1.23□□□□□ -2.21
ITGB1-216ENST00000493758 CENPXA8MT69 81 aa1.23□□□□□ -2.21
ITGB1-216ENST00000493758 LY6LH3BQJ8 138 aa1.23□□□□□ -2.21
ITGB1-216ENST00000493758 TCAPO15273 167 aa1.23□□□□□ -2.21
ITGB1-216ENST00000493758 PMCHP20382 165 aa1.23□□□□□ -2.21
ITGB1-216ENST00000493758 CNTFRP26992 372 aa1.23□□□□□ -2.21
ITGB1-216ENST00000493758 CSKP41240 450 aa1.23□□□□□ -2.21
ITGB1-216ENST00000493758 BCL2A1Q16548 175 aa1.23□□□□□ -2.21
ITGB1-216ENST00000493758 PYCR3Q53H96 274 aa1.23□□□□□ -2.21
ITGB1-216ENST00000493758 PLCXD3Q63HM9 321 aa1.23□□□□□ -2.21
ITGB1-216ENST00000493758 EPGNQ6UW88 154 aa1.23□□□□□ -2.21
ITGB1-216ENST00000493758 OR2K2Q8NGT1 345 aa1.23□□□□□ -2.21
ITGB1-216ENST00000493758 SMIM8Q96KF7 97 aa1.23□□□□□ -2.21
ITGB1-216ENST00000493758 C20orf144Q9BQM9 153 aa1.23□□□□□ -2.21
ITGB1-216ENST00000493758 COA1Q9GZY4 146 aa1.23□□□□□ -2.21
ITGB1-216ENST00000493758 C8orf33Q9H7E9 229 aaPredicted RBP1.23□□□□□ -2.21
ITGB1-216ENST00000493758 TUBA4BQ9H853 241 aa1.23□□□□□ -2.21
ITGB1-216ENST00000493758 MRPL16Q9NX20 251 aaKnown RBP1.23□□□□□ -2.21
ITGB1-216ENST00000493758 NAGKQ9UJ70 344 aa1.23□□□□□ -2.21
ITGB1-216ENST00000493758 FLVCR2Q9UPI3 526 aa1.23□□□□□ -2.21
ITGB1-216ENST00000493758 DOCK6Q96HP0 2047 aa1.23□□□□□ -2.21
ITGB1-216ENST00000493758 KIF13AQ9H1H9 1805 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 CUL9Q8IWT3 2517 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 EP400Q96L91 3159 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 SETXQ7Z333 2677 aaKnown RBP1.22□□□□□ -2.21
ITGB1-216ENST00000493758 A0A0J9YYE9 177 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 LOC389332A0A1B0GUA5 103 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 OR2AT4A6NND4 320 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 M0R1B8 84 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 UPK2O00526 184 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 GYG2O15488 501 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 GATCO43716 136 aaKnown RBP1.22□□□□□ -2.21
ITGB1-216ENST00000493758 TRAPPC6AO75865 159 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 TRBC1P01850 177 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 GZMHP20718 246 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 IVDP26440 423 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 SLC35B1P78383 322 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 MLIPQ5VWP3 458 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 ZNF767PQ75MW2 155 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 DPPA2Q7Z7J5 298 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 ZNF567Q8N184 647 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 CCNYL1Q8N7R7 359 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 GABARAPL1Q9H0R8 117 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 OR5V1Q9UGF6 321 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 NOS1P29475 1434 aa1.22□□□□□ -2.21
ITGB1-216ENST00000493758 THOC2Q8NI27 1593 aaKnown RBP1.21□□□□□ -2.22
ITGB1-216ENST00000493758 PLXNB3Q9ULL4 1909 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 FAM240AA0A1B0GVK7 77 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 SUPT3HB4E1H0 165 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 COX7A2P2O60397 106 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 PTTG1O95997 202 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 PDYNP01213 254 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 RHOCP08134 193 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 P0DMU3 169 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 FAM231AP0DMU4 169 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 FAM231CP0DMU5 169 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 CTLA4P16410 223 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 ZNF22P17026 224 aaPredicted RBP1.21□□□□□ -2.22
ITGB1-216ENST00000493758 ELK4P28324 431 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 HTR2CP28335 458 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 P2RY2P41231 377 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 CLDN8P56748 225 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 DAOAP59103 153 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 TAS2R60P59551 318 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 LCN2P80188 198 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 SPAG1Q07617 926 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 TMEM241Q24JQ0 296 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 TTMPQ5BVD1 217 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 FAM27D1Q5T7N8 215 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 SYT6Q5T7P8 510 aaPredicted RBP1.21□□□□□ -2.22
ITGB1-216ENST00000493758 CYHR1Q6ZMK1 362 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 HS3ST5Q8IZT8 346 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 DNAAF3Q8N9W5 541 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 BBOF1Q8ND07 529 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 OR52K2Q8NGK3 314 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 C2orf15Q8WU43 125 aaKnown RBP1.21□□□□□ -2.22
ITGB1-216ENST00000493758 PIH1D2Q8WWB5 315 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 METTL26Q96S19 204 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 IQCGQ9H095 443 aaKnown RBP1.21□□□□□ -2.22
ITGB1-216ENST00000493758 WDR55Q9H6Y2 383 aaPredicted RBP1.21□□□□□ -2.22
ITGB1-216ENST00000493758 PLEKHA1Q9HB21 404 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 ZNF286AQ9HBT8 521 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 DDIT4Q9NX09 232 aa1.21□□□□□ -2.22
ITGB1-216ENST00000493758 ERCC6Q03468 1493 aa1.2□□□□□ -2.22
ITGB1-216ENST00000493758 H7C2Y5 167 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms