RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 TSC22D1Q15714 1073 aa19.64■□□□□ 0.73
USF3-203ENST00000491165 PNLIPRP3Q17RR3 467 aa19.64■□□□□ 0.73
USF3-203ENST00000491165 Q6ZT83 130 aa19.64■□□□□ 0.73
USF3-203ENST00000491165 FOXL2NBQ6ZUU3 175 aa19.64■□□□□ 0.73
USF3-203ENST00000491165 OR5AP2Q8NGF4 316 aa19.64■□□□□ 0.73
USF3-203ENST00000491165 OR56B1Q8NGI3 324 aa19.64■□□□□ 0.73
USF3-203ENST00000491165 STOML3Q8TAV4 291 aa19.64■□□□□ 0.73
USF3-203ENST00000491165 RND1Q92730 232 aa19.64■□□□□ 0.73
USF3-203ENST00000491165 PIK3IP1Q96FE7 263 aa19.64■□□□□ 0.73
USF3-203ENST00000491165 FOXB1Q99853 325 aa19.64■□□□□ 0.73
USF3-203ENST00000491165 NELFAQ9H3P2 528 aa19.64■□□□□ 0.73
USF3-203ENST00000491165 ZNF319Q9P2F9 582 aa19.64■□□□□ 0.73
USF3-203ENST00000491165 PCDHB10Q9UN67 800 aa19.64■□□□□ 0.73
USF3-203ENST00000491165 RTTNQ86VV8 2226 aa19.64■□□□□ 0.73
USF3-203ENST00000491165 TRBV6-7A0A0A0MS04 114 aa19.63■□□□□ 0.73
USF3-203ENST00000491165 RER1O15258 196 aa19.63■□□□□ 0.73
USF3-203ENST00000491165 NR2C1P13056 603 aa19.63■□□□□ 0.73
USF3-203ENST00000491165 CCL1P22362 96 aa19.63■□□□□ 0.73
USF3-203ENST00000491165 DOK3Q7L591 496 aa19.63■□□□□ 0.73
USF3-203ENST00000491165 LRRC18Q8N456 261 aa19.63■□□□□ 0.73
USF3-203ENST00000491165 GPER1Q99527 375 aa19.63■□□□□ 0.73
USF3-203ENST00000491165 PNRC2Q9NPJ4 139 aaKnown RBP19.63■□□□□ 0.73
USF3-203ENST00000491165 TMEM38BQ9NVV0 291 aa19.63■□□□□ 0.73
USF3-203ENST00000491165 GPR132Q9UNW8 380 aa19.63■□□□□ 0.73
USF3-203ENST00000491165 TEX13DA0A0J9YY54 714 aaPredicted RBP19.63■□□□□ 0.73
USF3-203ENST00000491165 CEACAM18A8MTB9 384 aa19.63■□□□□ 0.73
USF3-203ENST00000491165 F8VVB4 439 aa19.63■□□□□ 0.73
USF3-203ENST00000491165 F8VWA3 439 aa19.63■□□□□ 0.73
USF3-203ENST00000491165 KCNAB3O43448 404 aa19.63■□□□□ 0.73
USF3-203ENST00000491165 CRTAPO75718 401 aaPredicted RBP19.63■□□□□ 0.73
USF3-203ENST00000491165 CDSNQ15517 529 aa19.63■□□□□ 0.73
USF3-203ENST00000491165 OR1S2Q8NGQ3 325 aa19.63■□□□□ 0.73
USF3-203ENST00000491165 URM1Q9BTM9 101 aaKnown RBP19.63■□□□□ 0.73
USF3-203ENST00000491165 C5orf66Q9H5L9 145 aa19.63■□□□□ 0.73
USF3-203ENST00000491165 ZNF629Q9UEG4 869 aaPredicted RBP19.63■□□□□ 0.73
USF3-203ENST00000491165 A0A096LPE4 126 aa19.62■□□□□ 0.73
USF3-203ENST00000491165 A0A1W2PPZ6 126 aa19.62■□□□□ 0.73
USF3-203ENST00000491165 RAB19A4D1S5 217 aa19.62■□□□□ 0.73
USF3-203ENST00000491165 MPTX1A8MV57 137 aa19.62■□□□□ 0.73
USF3-203ENST00000491165 LYZL6O75951 148 aa19.62■□□□□ 0.73
USF3-203ENST00000491165 TPT1P13693 172 aaKnown RBP19.62■□□□□ 0.73
USF3-203ENST00000491165 NPY4RP50391 375 aa19.62■□□□□ 0.73
USF3-203ENST00000491165 TMEM50BP56557 158 aa19.62■□□□□ 0.73
USF3-203ENST00000491165 ARF1P84077 181 aaKnown RBP19.62■□□□□ 0.73
USF3-203ENST00000491165 KCNMB1Q16558 191 aa19.62■□□□□ 0.73
USF3-203ENST00000491165 FAM57BQ71RH2 274 aa19.62■□□□□ 0.73
USF3-203ENST00000491165 ZNF283Q8N7M2 679 aa19.62■□□□□ 0.73
USF3-203ENST00000491165 OCSTAMPQ9BR26 566 aa19.62■□□□□ 0.73
USF3-203ENST00000491165 A0A1W2PP11 408 aa19.61■□□□□ 0.73
USF3-203ENST00000491165 MFNGO00587 321 aa19.61■□□□□ 0.73
USF3-203ENST00000491165 RAD51DO75771 328 aa19.61■□□□□ 0.73
USF3-203ENST00000491165 OPRM1P35372 400 aa19.61■□□□□ 0.73
USF3-203ENST00000491165 CBX5P45973 191 aa19.61■□□□□ 0.73
USF3-203ENST00000491165 SGCAQ16586 387 aa19.61■□□□□ 0.73
USF3-203ENST00000491165 GFOD2Q3B7J2 385 aa19.61■□□□□ 0.73
USF3-203ENST00000491165 OR5H2Q8NGV7 314 aa19.61■□□□□ 0.73
USF3-203ENST00000491165 FGFBP3Q8TAT2 258 aa19.61■□□□□ 0.73
USF3-203ENST00000491165 TMEM230Q96A57 120 aa19.61■□□□□ 0.73
USF3-203ENST00000491165 ARHGAP5-AS1Q96IT6 56 aa19.61■□□□□ 0.73
USF3-203ENST00000491165 SCGB3A2Q96PL1 93 aa19.61■□□□□ 0.73
USF3-203ENST00000491165 ZNF416Q9BWM5 594 aa19.61■□□□□ 0.73
USF3-203ENST00000491165 NKX6-2Q9C056 277 aaPredicted RBP19.61■□□□□ 0.73
USF3-203ENST00000491165 ZNF503-AS2A6NEH8 195 aa19.61■□□□□ 0.73
USF3-203ENST00000491165 SFT2D2O95562 160 aa19.61■□□□□ 0.73
USF3-203ENST00000491165 ANOS1P23352 680 aa19.61■□□□□ 0.73
USF3-203ENST00000491165 ZNF84P51523 738 aa19.61■□□□□ 0.73
USF3-203ENST00000491165 GRB2P62993 217 aaKnown RBP19.61■□□□□ 0.73
USF3-203ENST00000491165 MRPS34P82930 218 aaKnown RBP19.61■□□□□ 0.73
USF3-203ENST00000491165 TMEM211Q6ICI0 200 aa19.61■□□□□ 0.73
USF3-203ENST00000491165 RAB18Q9NP72 206 aa19.61■□□□□ 0.73
USF3-203ENST00000491165 A0A0B4J2A0 478 aa19.6■□□□□ 0.73
USF3-203ENST00000491165 FGF16O43320 207 aa19.6■□□□□ 0.73
USF3-203ENST00000491165 PATE4P0C8F1 98 aa19.6■□□□□ 0.73
USF3-203ENST00000491165 FPR2P25090 351 aa19.6■□□□□ 0.73
USF3-203ENST00000491165 ENDOGQ14249 297 aaKnown RBP19.6■□□□□ 0.73
USF3-203ENST00000491165 BOLLQ8N9W6 283 aaKnown RBP19.6■□□□□ 0.73
USF3-203ENST00000491165 SLC30A7Q8NEW0 376 aa19.6■□□□□ 0.73
USF3-203ENST00000491165 FBXO17Q96EF6 278 aa19.6■□□□□ 0.73
USF3-203ENST00000491165 RNF126Q9BV68 326 aa19.6■□□□□ 0.73
USF3-203ENST00000491165 SHPKQ9UHJ6 478 aa19.6■□□□□ 0.73
USF3-203ENST00000491165 UBR5O95071 2799 aaPredicted RBP19.6■□□□□ 0.73
USF3-203ENST00000491165 A8MXE2 369 aa19.6■□□□□ 0.73
USF3-203ENST00000491165 AMY2BP19961 511 aa19.6■□□□□ 0.73
USF3-203ENST00000491165 COX5AP20674 150 aa19.6■□□□□ 0.73
USF3-203ENST00000491165 NAAAQ02083 359 aa19.6■□□□□ 0.73
USF3-203ENST00000491165 ARFRP1Q13795 201 aa19.6■□□□□ 0.73
USF3-203ENST00000491165 CLEC18BQ6UXF7 455 aa19.6■□□□□ 0.73
USF3-203ENST00000491165 SKA3Q8IX90 412 aa19.6■□□□□ 0.73
USF3-203ENST00000491165 PNLDC1Q8NA58 520 aaKnown RBP19.6■□□□□ 0.73
USF3-203ENST00000491165 SSC4DQ8WTU2 575 aa19.6■□□□□ 0.73
USF3-203ENST00000491165 OR10A2Q9H208 303 aa19.6■□□□□ 0.73
USF3-203ENST00000491165 MYO18BQ8IUG5 2567 aa19.6■□□□□ 0.73
USF3-203ENST00000491165 CNOT4O95628 575 aaKnown RBP19.59■□□□□ 0.73
USF3-203ENST00000491165 PLATP00750 562 aa19.59■□□□□ 0.73
USF3-203ENST00000491165 MSR1P21757 451 aa19.59■□□□□ 0.73
USF3-203ENST00000491165 ARHGDIBP52566 201 aa19.59■□□□□ 0.73
USF3-203ENST00000491165 SLC9A3R2Q15599 337 aa19.59■□□□□ 0.73
USF3-203ENST00000491165 HIKESHIQ53FT3 197 aa19.59■□□□□ 0.73
USF3-203ENST00000491165 PEG10Q86TG7 708 aaKnown RBP19.59■□□□□ 0.73
USF3-203ENST00000491165 CXorf67Q86X51 503 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms