RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 TRPM7Q96QT4 1865 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 IGSF23A1L1A6 192 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 TNFSF14O43557 240 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 CBR1P16152 277 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 WNT3P56703 355 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 PPP2CBP62714 309 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 PPP2CAP67775 309 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 DUSP2Q05923 314 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 SLC25A35Q3KQZ1 300 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 PDPNQ86YL7 162 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 OR13C5Q8NGS8 318 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 SLC25A40Q8TBP6 338 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 COPS9Q8WXC6 57 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 ARHGAP5-AS1Q96IT6 56 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 STARD10Q9Y365 291 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 M0R1X1 148 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 GABRG2P18507 467 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 KRTDAPP60985 99 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 B4GALNT1Q00973 533 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 GABRA6Q16445 453 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 KHDC1LQ5JSQ8 128 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 ETV3LQ6ZN32 361 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 BTLAQ7Z6A9 289 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 NECAP1Q8NC96 275 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 GREB1Q4ZG55 1949 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 HLA-BQ31612 363 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 KHDC3LQ587J8 217 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 VAX2Q9UIW0 290 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 BRWD1Q9NSI6 2320 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 SHISA7A6NL88 538 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 PRDX4Q13162 271 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 INPP5JQ15735 1006 aaPredicted RBP7.87□□□□□ -1.15
LSAMP-205ENST00000490035 TMEM30BQ3MIR4 351 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 PRNDQ9UKY0 176 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 DNAJC13O75165 2243 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 ADAM20O43506 726 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 B4GALT3O60512 393 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 MPGP29372 298 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 LRFN3Q9BTN0 628 aa7.87□□□□□ -1.15
LSAMP-205ENST00000490035 CACNA1DQ01668 2161 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 DOCK4Q8N1I0 1966 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 SCGB1C2P0DMR2 95 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 TMEM11P17152 192 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 ZNF117Q03924 483 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 ACY3Q96HD9 319 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 MAP1LC3CQ9BXW4 147 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 PARD6AQ9NPB6 346 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 HIST1H1BP16401 226 aaKnown RBP7.86□□□□□ -1.15
LSAMP-205ENST00000490035 GFERP55789 205 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 DEFB109BQ30KR1 87 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 CMBLQ96DG6 245 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 TM4SF19Q96DZ7 209 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 POM121Q96HA1 1249 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 GABRG3Q99928 467 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 PNPP00491 289 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 SLC25A5P05141 298 aaKnown RBP7.86□□□□□ -1.15
LSAMP-205ENST00000490035 ELOBQ15370 118 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 Q56UQ5 140 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 ACER2Q5QJU3 275 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 OR4A4PQ8NGN8 299 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 TRAF4Q9BUZ4 470 aaPredicted RBP7.86□□□□□ -1.15
LSAMP-205ENST00000490035 C1QTNF6Q9BXI9 259 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 GHITMQ9H3K2 345 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 MBD1Q9UIS9 605 aaPredicted RBP7.86□□□□□ -1.15
LSAMP-205ENST00000490035 ASB1Q9Y576 335 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 HIST1H1EP10412 219 aaKnown RBP7.86□□□□□ -1.15
LSAMP-205ENST00000490035 BCL3P20749 454 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 FDX2Q6P4F2 183 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 OR11G2Q8NGC1 345 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 GMPPAQ96IJ6 420 aaPredicted RBP7.86□□□□□ -1.15
LSAMP-205ENST00000490035 ALKBH3Q96Q83 286 aaPredicted RBP7.86□□□□□ -1.15
LSAMP-205ENST00000490035 NAT8BQ9UHF3 227 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 MAP1LC3B2A6NCE7 125 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 MPDU1O75352 247 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 IZUMO4Q1ZYL8 232 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 TMEM65Q6PI78 240 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 PRSS3P2Q8NHM4 247 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 FAM210BQ96KR6 192 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 ATG101Q9BSB4 218 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 MAP1LC3BQ9GZQ8 125 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 ALX4Q9H161 411 aaPredicted RBP7.86□□□□□ -1.15
LSAMP-205ENST00000490035 RBFOX3A6NFN3 312 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 AP4M1O00189 453 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 ISLRO14498 428 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 ITGBL1O95965 494 aaPredicted RBP7.86□□□□□ -1.15
LSAMP-205ENST00000490035 B3GALT4O96024 378 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 SMIM6P0DI80 62 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 TNFAIP6P98066 277 aaPredicted RBP7.86□□□□□ -1.15
LSAMP-205ENST00000490035 ERRFI1Q9UJM3 462 aaPredicted RBP7.86□□□□□ -1.15
LSAMP-205ENST00000490035 NPTNQ9Y639 398 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 IGF2P01344 180 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 CRISP2P16562 243 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 ZIC1Q15915 447 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 CCDC144NLQ6NUI1 221 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 MRGPRGQ86SM5 289 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 OR10D3Q8NH80 312 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 P4HTMQ9NXG6 502 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 OR5V1Q9UGF6 321 aa7.86□□□□□ -1.15
LSAMP-205ENST00000490035 SEMG1P04279 462 aa7.85□□□□□ -1.15
LSAMP-205ENST00000490035 SKP2Q13309 424 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms