RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 IGKV1-27A0A075B6S5 117 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 TRBV5-5A0A0J9YX44 114 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 A0A1W2PPH5 198 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 ZNF879B4DU55 563 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 PTGES3LE9PB15 166 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 DENRO43583 198 aaKnown RBP8.23□□□□□ -1.09
CPSF4-213ENST00000484112 RGS10O43665 173 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 CHRM2P08172 466 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 FSTP19883 344 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 CRHBPP24387 322 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 PRDX2P32119 198 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 PPP3R1P63098 170 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 IRF3Q14653 427 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 PDCD1Q15116 288 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 SPHARQ15513 63 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 KISS1Q15726 138 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 METTL11BQ5VVY1 283 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 XAF1Q6GPH4 301 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 ASPHD2Q6ICH7 369 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 SLC25A26Q70HW3 274 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 BTN2A1Q7KYR7 527 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 PRSS48Q7RTY5 328 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 ANGPTL5Q86XS5 388 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 CDH26Q8IXH8 852 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 CMTM4Q8IZR5 234 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 FAM216BQ8N7L0 139 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 PXT1Q8NFP0 134 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 OR13C9Q8NGT0 318 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 FAM110DQ8TAY7 271 aaPredicted RBP8.23□□□□□ -1.09
CPSF4-213ENST00000484112 RGP1Q92546 391 aaPredicted RBP8.23□□□□□ -1.09
CPSF4-213ENST00000484112 PGLYRP3Q96LB9 341 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 PCGF1Q9BSM1 259 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 DCTN5Q9BTE1 182 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 YTHDF1Q9BYJ9 559 aaKnown RBP8.23□□□□□ -1.09
CPSF4-213ENST00000484112 CNTD2Q9H8S5 307 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 SMURF1Q9HCE7 757 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 ISYNA1Q9NPH2 558 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 NOX4Q9NPH5 578 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 TMEM138Q9NPI0 162 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 MTCH1Q9NZJ7 389 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 SLC25A10Q9UBX3 287 aaPredicted RBP8.23□□□□□ -1.09
CPSF4-213ENST00000484112 RPUSD1Q9UJJ7 312 aaKnown RBP8.23□□□□□ -1.09
CPSF4-213ENST00000484112 FOXJ3Q9UPW0 622 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 RNF114Q9Y508 228 aa8.23□□□□□ -1.09
CPSF4-213ENST00000484112 DOCK11Q5JSL3 2073 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 RFPL4AA6NLU0 287 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 C22orf46C9J442 243 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 RFPL4AL1F8VTS6 287 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 H3BSH0 61 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 KDM4BO94953 1096 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 NDUFA7O95182 113 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 LALBAP00709 142 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 MELTFP08582 738 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 HCKP08631 526 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 CELP19835 753 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 AMY2BP19961 511 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 PSMA1P25786 263 aaKnown RBP8.22□□□□□ -1.09
CPSF4-213ENST00000484112 GABRA2P47869 451 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 GABARAPL2P60520 117 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 HOXA4Q00056 320 aaPredicted RBP8.22□□□□□ -1.09
CPSF4-213ENST00000484112 ZNF146Q15072 292 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 TRAM1Q15629 374 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 TAF9Q16594 264 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 DGUOKQ16854 277 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 DMRTC1Q5HYR2 192 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 HIST2H2BDQ6DRA6 164 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 ELP2Q6IA86 826 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 OR5T2Q8NGG2 359 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 OR5D13Q8NGL4 314 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 PPP1R35Q8TAP8 253 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 NPRL2Q8WTW4 380 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 ST8SIA4Q92187 359 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 PRDM13Q9H4Q3 707 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 TCF7L1Q9HCS4 588 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 PCDHB16Q9NRJ7 776 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 SNTG1Q9NSN8 517 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 LSM2Q9Y333 95 aaKnown RBP8.22□□□□□ -1.09
CPSF4-213ENST00000484112 MAB21L2Q9Y586 359 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 SIRT4Q9Y6E7 314 aaPredicted RBP8.22□□□□□ -1.09
CPSF4-213ENST00000484112 TGP01266 2768 aa8.22□□□□□ -1.09
CPSF4-213ENST00000484112 PKD1L1Q8TDX9 2849 aa8.21□□□□□ -1.09
CPSF4-213ENST00000484112 K7N7A8 449 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 M0R1W7 72 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 ZNF780AO75290 641 aaPredicted RBP8.21□□□□□ -1.1
CPSF4-213ENST00000484112 TOX4O94842 621 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 TSPAN15O95858 294 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 SFTPBP07988 381 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 IGFBP3P17936 291 aaPredicted RBP8.21□□□□□ -1.1
CPSF4-213ENST00000484112 MTNR1BP49286 362 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 POU3F4P49335 361 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 ZP1P60852 638 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 GMFBP60983 142 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 RPS11P62280 158 aaKnown RBP eCLIP8.21□□□□□ -1.1
CPSF4-213ENST00000484112 IKZF1Q13422 519 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 BLMHQ13867 455 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 DOC2BQ14184 412 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 METAP1DQ6UB28 335 aaPredicted RBP8.21□□□□□ -1.1
CPSF4-213ENST00000484112 ASCL4Q6XD76 172 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 FAM58AQ8N1B3 248 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 NKAIN3Q8N8D7 197 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms