RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	LRRC6	Q86X45	466 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	DAW1	Q8N136	415 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	C17orf78	Q8N4C9	275 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	RNF10	Q8N5U6	811 aa	Known RBP	0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	CYB561A3	Q8NBI2	242 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	ATP6V1C2	Q8NEY4	427 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	OR2Z1	Q8NG97	314 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	CASTOR1	Q8WTX7	329 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	NELFB	Q8WX92	580 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	RXFP2	Q8WXD0	754 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	TOP1MT	Q969P6	601 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	ZNF707	Q96C28	371 aa	Predicted RBP	0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	RILP	Q96NA2	401 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	TRNT1	Q96Q11	434 aa	Known RBP	0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	APOL4	Q9BPW4	351 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	UQCC2	Q9BRT2	126 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	TMED9	Q9BVK6	235 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	HINT2	Q9BX68	163 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	ARV1	Q9H2C2	271 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	SLC38A1	Q9H2H9	487 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	OR51B5	Q9H339	312 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	DSN1	Q9H410	356 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	PRORY	Q9H606	182 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	TMBIM4	Q9HC24	238 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	SDHAF3	Q9NRP4	125 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	HEBP1	Q9NRV9	189 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	RBM22	Q9NW64	420 aa	Known RBP eCLIP	0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	COMMD9	Q9P000	198 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	ZMAT5	Q9UDW3	170 aa	Known RBP	0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	ACOT9	Q9Y305	439 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	ORC6	Q9Y5N6	252 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	ZNF780B	Q9Y6R6	833 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	ENPP4	Q9Y6X5	453 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	MAP3K19	Q56UN5	1328 aa		0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	USP42	Q9H9J4	1324 aa	Known RBP	0.88	□□□□□ -2.27
CCNL1-223	ENST00000481173	PIK3R4	Q99570	1358 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173		A0A0A6YYD5	115 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	LINC00854	A0A1B0GVQ3	168 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173		A0A1B0GW15	77 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	TVP23A	A6NH52	213 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173		A8MWL6	223 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173		F8VZ95	297 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	LINC01619	G3V211	115 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	CLDN34	H7C241	214 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173		I3L4J1	428 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173		J3QT63	122 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	PLPP3	O14495	311 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	LIN7A	O14910	233 aa	Predicted RBP	0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	FABP7	O15540	132 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	RNF113A	O15541	343 aa	Known RBP	0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	ZMPSTE24	O75844	475 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	SNAP29	O95721	258 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	LDOC1	O95751	146 aa	Predicted RBP	0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	PTTG1	O95997	202 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	CST4	P01036	141 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	OR4Q2	P0C623	313 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	OCM	P0CE72	109 aa	Predicted RBP	0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	SCGB1C2	P0DMR2	95 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	THRA	P10827	490 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	ATF1	P18846	271 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	CXCR1	P25024	350 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	HLA-DMA	P28067	261 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	ELK4	P28324	431 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	GNRHR	P30968	328 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	UGT2B10	P36537	528 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	CBX5	P45973	191 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	CD151	P48509	253 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	XK	P51811	444 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	NDUFA8	P51970	172 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	CCL23	P55773	120 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	RAB25	P57735	213 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	UBE2K	P61086	200 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	PPP1CA	P62136	330 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	RPL10A	P62906	217 aa	Known RBP	0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	TPM4	P67936	248 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	IL5RA	Q01344	420 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	BNIP2	Q12982	314 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	STX3	Q13277	289 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	TRIP13	Q15645	432 aa	Predicted RBP	0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	C18orf21	Q32NC0	220 aa	Predicted RBP	0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	NDUFAF6	Q330K2	333 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	BSX	Q3C1V8	233 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	UBE2NL	Q5JXB2	153 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	STEAP4	Q687X5	459 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	PDPK2P	Q6A1A2	396 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	FAM131A	Q6UXB0	335 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	CLEC19A	Q6UXS0	136 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	MRPL52	Q86TS9	123 aa	Known RBP	0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	SETD3	Q86TU7	594 aa	Predicted RBP	0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	COMTD1	Q86VU5	262 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	SPATA24	Q86W54	205 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	SLC13A5	Q86YT5	568 aa	Predicted RBP	0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	CRLF3	Q8IUI8	442 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	ORMDL3	Q8N138	153 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	CCNYL1	Q8N7R7	359 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	DRAXIN	Q8NBI3	349 aa	Predicted RBP	0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	OR4K17	Q8NGC6	315 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	OR5AR1	Q8NGP9	310 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	OR5H2	Q8NGV7	314 aa		0.87	□□□□□ -2.27
CCNL1-223	ENST00000481173	OR1L1	Q8NH94	360 aa		0.87	□□□□□ -2.27

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms