RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 MSMBP08118 114 aa7.41□□□□□ -1.22
DDX56-211ENST00000479602 EGR1P18146 543 aa7.41□□□□□ -1.22
DDX56-211ENST00000479602 CALRP27797 417 aaKnown RBP7.41□□□□□ -1.22
DDX56-211ENST00000479602 CTF1Q16619 201 aa7.41□□□□□ -1.22
DDX56-211ENST00000479602 SLC16A12Q6ZSM3 486 aa7.41□□□□□ -1.22
DDX56-211ENST00000479602 SLC36A1Q7Z2H8 476 aa7.41□□□□□ -1.22
DDX56-211ENST00000479602 ZNF561Q8N587 486 aa7.41□□□□□ -1.22
DDX56-211ENST00000479602 OR51F2Q8NH61 342 aa7.41□□□□□ -1.22
DDX56-211ENST00000479602 RPL3LQ92901 407 aaKnown RBP7.41□□□□□ -1.22
DDX56-211ENST00000479602 DVL3Q92997 716 aaPredicted RBP7.41□□□□□ -1.22
DDX56-211ENST00000479602 KCTD12Q96CX2 325 aaKnown RBP7.41□□□□□ -1.22
DDX56-211ENST00000479602 MED30Q96HR3 178 aa7.41□□□□□ -1.22
DDX56-211ENST00000479602 FUNDC2Q9BWH2 189 aa7.41□□□□□ -1.22
DDX56-211ENST00000479602 CST11Q9H112 138 aa7.41□□□□□ -1.22
DDX56-211ENST00000479602 PPP1R3EQ9H7J1 279 aa7.41□□□□□ -1.22
DDX56-211ENST00000479602 SPACA1Q9HBV2 294 aa7.41□□□□□ -1.22
DDX56-211ENST00000479602 RCC2Q9P258 522 aaKnown RBP7.41□□□□□ -1.22
DDX56-211ENST00000479602 NLKQ9UBE8 527 aa7.41□□□□□ -1.22
DDX56-211ENST00000479602 METRNQ9UJH8 293 aa7.41□□□□□ -1.22
DDX56-211ENST00000479602 PRKDCP78527 4128 aaKnown RBP7.41□□□□□ -1.22
DDX56-211ENST00000479602 TRBV23-1A0A0A0MS06 115 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 IGKV1-12A0A0C4DH73 117 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 A0A0G2JK05 382 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 PNMA8CA0A1B0GUJ8 204 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 A6NLC8 198 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 IFITM5A6NNB3 132 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 CEACAM18A8MTB9 384 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 TMEM14DPA8MWL7 114 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 SYNGR1O43759 233 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 AIREO43918 545 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 CA11O75493 328 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 RHBDL1O75783 438 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 SCGNO76038 276 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 TPPPO94811 219 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 IGKV1D-12P01611 117 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 RBP4P02753 201 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 HCKP08631 526 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 WNT2P09544 360 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 OCMP0CE72 109 aaPredicted RBP7.4□□□□□ -1.22
DDX56-211ENST00000479602 RAB3BP20337 219 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 RAB6AP20340 208 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 GLRA1P23415 457 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 GADD45AP24522 165 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 HTR2CP28335 458 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 ERP29P30040 261 aaKnown RBP7.4□□□□□ -1.22
DDX56-211ENST00000479602 HILS1P60008 231 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 QRFPP83859 136 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 INSL4Q14641 139 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 FAM27D1Q5T7N8 215 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 SLC25A26Q70HW3 274 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 NLRC3Q7RTR2 1065 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 GPR141Q7Z602 305 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 GAPTQ8N292 157 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 FAM216AQ8WUB2 273 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 TMEM203Q969S6 136 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 SLC25A28Q96A46 364 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 TMIGD2Q96BF3 282 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 NEIL1Q96FI4 390 aaPredicted RBP7.4□□□□□ -1.22
DDX56-211ENST00000479602 CMTM3Q96MX0 182 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 GFI1Q99684 422 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 TMEM246Q9BRR3 403 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 TM2D1Q9BX74 207 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 TMPRSS13Q9BYE2 586 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 RBM38Q9H0Z9 239 aaKnown RBP7.4□□□□□ -1.22
DDX56-211ENST00000479602 CNTD2Q9H8S5 307 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 SMURF1Q9HCE7 757 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 TREM2Q9NZC2 230 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 NDUFA13Q9P0J0 144 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 ETV7Q9Y603 341 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 CACNG2Q9Y698 323 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 V9GY05 133 aa7.4□□□□□ -1.22
DDX56-211ENST00000479602 DOCK11Q5JSL3 2073 aa7.4□□□□□ -1.23
DDX56-211ENST00000479602 ARHGAP32A7KAX9 2087 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 IGKV1D-17A0A075B6S4 117 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 A0A0A6YYH2 397 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 TRAV20A0A0B4J274 112 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 SMIM31A0A1B0GVY4 71 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 FAM230AA0A1W2PPH8 454 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 hCG_1807616A0A1W2PRN6 198 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 SHISA3A0PJX4 238 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 A6NJ64 397 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 OR2AT4A6NND4 320 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 PPIHO43447 177 aaKnown RBP7.39□□□□□ -1.23
DDX56-211ENST00000479602 CDC14BO60729 498 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 ZNF737O75373 536 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 NXPH2O95156 264 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 CYB5R3P00387 301 aaPredicted RBP7.39□□□□□ -1.23
DDX56-211ENST00000479602 GRPP07492 148 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 CALCBP10092 127 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 PSG2P11465 335 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 GTF2F2P13984 249 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 SRP14P37108 136 aaKnown RBP7.39□□□□□ -1.23
DDX56-211ENST00000479602 RBM11P57052 281 aaKnown RBP7.39□□□□□ -1.23
DDX56-211ENST00000479602 IL13RA1P78552 427 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 PAX2Q02962 417 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 BLMHQ13867 455 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 GPR107Q5VW38 600 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 ZNF841Q6ZN19 808 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 ZNF826PQ6ZT77 177 aa7.39□□□□□ -1.23
DDX56-211ENST00000479602 ZNF554Q86TJ5 538 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms