RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 ISPDA4D126 451 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 CLPXO76031 633 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 IGFBP3P17936 291 aaPredicted RBP12.04□□□□□ -0.48
USP11-207ENST00000478596 RAB3BP20337 219 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 VBP1P61758 197 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 MAB21L1Q13394 359 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 BLMHQ13867 455 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 PDCD1Q15116 288 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 KISS1Q15726 138 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 C2orf68Q2NKX9 166 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 RUSC1-AS1Q66K80 236 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 SLC25A26Q70HW3 274 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 WDR86Q86TI4 376 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 ANGPTL5Q86XS5 388 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 ANKRD13BQ86YJ7 626 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 BATF2Q8N1L9 274 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 SCCPDHQ8NBX0 429 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 ZNF420Q8TAQ5 688 aaPredicted RBP12.04□□□□□ -0.48
USP11-207ENST00000478596 RAB2BQ8WUD1 216 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 LRRC29Q8WV35 223 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 SLAMF9Q96A28 289 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 NAA50Q9GZZ1 169 aaKnown RBP12.04□□□□□ -0.48
USP11-207ENST00000478596 RNF167Q9H6Y7 350 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 AK6Q9Y3D8 172 aaKnown RBP12.04□□□□□ -0.48
USP11-207ENST00000478596 WIPI2Q9Y4P8 454 aa12.04□□□□□ -0.48
USP11-207ENST00000478596 A0A1B0GWJ7 208 aa12.03□□□□□ -0.48
USP11-207ENST00000478596 CLDN25C9JDP6 229 aa12.03□□□□□ -0.48
USP11-207ENST00000478596 TRAPPC2LH3BP13 241 aa12.03□□□□□ -0.48
USP11-207ENST00000478596 IFNL4K9M1U5 179 aa12.03□□□□□ -0.48
USP11-207ENST00000478596 CDIPTO14735 213 aa12.03□□□□□ -0.48
USP11-207ENST00000478596 GABARAPO95166 117 aa12.03□□□□□ -0.48
USP11-207ENST00000478596 CDRT1O95170 752 aa12.03□□□□□ -0.48
USP11-207ENST00000478596 CRYBA1P05813 215 aa12.03□□□□□ -0.48
USP11-207ENST00000478596 OR3A4PP47883 348 aa12.03□□□□□ -0.48
USP11-207ENST00000478596 MTNR1BP49286 362 aa12.03□□□□□ -0.48
USP11-207ENST00000478596 NCS1P62166 190 aa12.03□□□□□ -0.48
USP11-207ENST00000478596 MPPED2Q15777 294 aa12.03□□□□□ -0.48
USP11-207ENST00000478596 AWAT2Q6E213 333 aa12.03□□□□□ -0.48
USP11-207ENST00000478596 ZNF826PQ6ZT77 177 aa12.03□□□□□ -0.48
USP11-207ENST00000478596 MKXQ8IYA7 352 aa12.03□□□□□ -0.48
USP11-207ENST00000478596 ERGIC1Q969X5 290 aa12.03□□□□□ -0.48
USP11-207ENST00000478596 TIMD4Q96H15 378 aa12.03□□□□□ -0.48
USP11-207ENST00000478596 FGF23Q9GZV9 251 aaPredicted RBP12.03□□□□□ -0.48
USP11-207ENST00000478596 PPIL3Q9H2H8 161 aaKnown RBP12.03□□□□□ -0.48
USP11-207ENST00000478596 SMURF1Q9HCE7 757 aa12.03□□□□□ -0.48
USP11-207ENST00000478596 DNAJB11Q9UBS4 358 aa12.03□□□□□ -0.48
USP11-207ENST00000478596 MRPS28Q9Y2Q9 187 aaKnown RBP12.03□□□□□ -0.48
USP11-207ENST00000478596 RNF114Q9Y508 228 aa12.03□□□□□ -0.48
USP11-207ENST00000478596 RYR2Q92736 4967 aa12.02□□□□□ -0.48
USP11-207ENST00000478596 TRAV1-2A0A0B4J238 106 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 HOXA3O43365 443 aaPredicted RBP12.02□□□□□ -0.49
USP11-207ENST00000478596 FOXH1O75593 365 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 NXPH2O95156 264 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 CYB5R3P00387 301 aaPredicted RBP12.02□□□□□ -0.49
USP11-207ENST00000478596 CD80P33681 288 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 SDC2P34741 201 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 TGFBR1P36897 503 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 GATA4P43694 442 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 PSMD7P51665 324 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 RSU1Q15404 277 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 RAB11BQ15907 218 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 SPRNQ5BIV9 151 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 FIP1L1Q6UN15 594 aaKnown RBP12.02□□□□□ -0.49
USP11-207ENST00000478596 SLC16A12Q6ZSM3 486 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 LRRTM1Q86UE6 522 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 ZNF671Q8TAW3 534 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 ISOC1Q96CN7 298 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 FOXRED1Q96CU9 486 aaPredicted RBP12.02□□□□□ -0.49
USP11-207ENST00000478596 PKIBQ9C010 78 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 OR51I2Q9H344 312 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 PRDM13Q9H4Q3 707 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 GCM1Q9NP62 436 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 MMP26Q9NRE1 261 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 TMEM106BQ9NUM4 274 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 RNF7Q9UBF6 113 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 ING4Q9UNL4 249 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 POLR3KQ9Y2Y1 108 aaPredicted RBP12.02□□□□□ -0.49
USP11-207ENST00000478596 CACNG2Q9Y698 323 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 V9GY05 133 aa12.02□□□□□ -0.49
USP11-207ENST00000478596 IGKV1-27A0A075B6S5 117 aa12.01□□□□□ -0.49
USP11-207ENST00000478596 AKR7A2O43488 359 aa12.01□□□□□ -0.49
USP11-207ENST00000478596 SYNGR1O43759 233 aa12.01□□□□□ -0.49
USP11-207ENST00000478596 ANGPTL7O43827 346 aa12.01□□□□□ -0.49
USP11-207ENST00000478596 CSTBP04080 98 aaKnown RBP12.01□□□□□ -0.49
USP11-207ENST00000478596 ALDOBP05062 364 aa12.01□□□□□ -0.49
USP11-207ENST00000478596 RANBP1P43487 201 aa12.01□□□□□ -0.49
USP11-207ENST00000478596 TMBIM6P55061 237 aa12.01□□□□□ -0.49
USP11-207ENST00000478596 SNU13P55769 128 aaKnown RBP12.01□□□□□ -0.49
USP11-207ENST00000478596 OR10A3P58181 314 aa12.01□□□□□ -0.49
USP11-207ENST00000478596 PROK1P58294 105 aa12.01□□□□□ -0.49
USP11-207ENST00000478596 SMIM21Q3B7S5 101 aa12.01□□□□□ -0.49
USP11-207ENST00000478596 HES5Q5TA89 166 aa12.01□□□□□ -0.49
USP11-207ENST00000478596 C11orf87Q6NUJ2 197 aa12.01□□□□□ -0.49
USP11-207ENST00000478596 ZNF529Q6P280 563 aa12.01□□□□□ -0.49
USP11-207ENST00000478596 KRT74Q7RTS7 529 aa12.01□□□□□ -0.49
USP11-207ENST00000478596 TPRA1Q86W33 373 aa12.01□□□□□ -0.49
USP11-207ENST00000478596 CALHM1Q8IU99 346 aa12.01□□□□□ -0.49
USP11-207ENST00000478596 OR6M1Q8NGM8 313 aa12.01□□□□□ -0.49
USP11-207ENST00000478596 AQP3Q92482 292 aa12.01□□□□□ -0.49
USP11-207ENST00000478596 RAB1CQ92928 201 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms