RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 IGKV3-15P01624 115 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 GLAP06280 429 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 OR5H8P0DN80 308 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 CBR1P16152 277 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 GLRA1P23415 457 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 HAAOP46952 286 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 GPM6AP51674 278 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 GNG3P63215 75 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 CYCSP99999 105 aaKnown RBP8.4□□□□□ -1.06
USP39-214ENST00000474572 ZNF169Q14929 603 aaPredicted RBP8.4□□□□□ -1.06
USP39-214ENST00000474572 FAM76BQ5HYJ3 339 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 Q6ZS92 163 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 ZNF546Q86UE3 836 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 SLC51BQ86UW2 128 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 MYPOPQ86VE0 399 aaPredicted RBP8.4□□□□□ -1.06
USP39-214ENST00000474572 ZNF573Q86YE8 665 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 ZADH2Q8N4Q0 377 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 MBD3L2Q8NHZ7 208 aaPredicted RBP8.4□□□□□ -1.06
USP39-214ENST00000474572 SCARB1Q8WTV0 552 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 GTF3AQ92664 365 aaKnown RBP8.4□□□□□ -1.06
USP39-214ENST00000474572 SLAMF9Q96A28 289 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 DOCK7Q96N67 2140 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 HIST1H2AAQ96QV6 131 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 TAAR6Q96RI8 345 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 SLX1AQ9BQ83 275 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 PDCD10Q9BUL8 212 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 ARL6Q9H0F7 186 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 IFT22Q9H7X7 185 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 PLSCR4Q9NRQ2 329 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 ZNF629Q9UEG4 869 aaPredicted RBP8.4□□□□□ -1.06
USP39-214ENST00000474572 LHX6Q9UPM6 363 aa8.4□□□□□ -1.06
USP39-214ENST00000474572 C14orf166Q9Y224 244 aaKnown RBP8.4□□□□□ -1.06
USP39-214ENST00000474572 CFAP54Q96N23 3096 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 POM121CA8CG34 1229 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 IQCF6A8MYZ5 107 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 PROB1E7EW31 1015 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 F8VVB4 439 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 F8VWA3 439 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 TRAPPC2LH3BP13 241 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 J3QT63 122 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 SYNGR1O43759 233 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 LILRA1O75019 489 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 OR7C1O76099 320 aaPredicted RBP8.39□□□□□ -1.07
USP39-214ENST00000474572 CGAP01215 116 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 PGAM2P15259 253 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 OPRM1P35372 400 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 UBE2NP61088 152 aaKnown RBP8.39□□□□□ -1.07
USP39-214ENST00000474572 UBA52P62987 128 aaKnown RBP8.39□□□□□ -1.07
USP39-214ENST00000474572 BAMBIQ13145 260 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 MRPL49Q13405 166 aaKnown RBP8.39□□□□□ -1.07
USP39-214ENST00000474572 SLC9A3R2Q15599 337 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 PLEKHN1Q494U1 663 aaPredicted RBP8.39□□□□□ -1.07
USP39-214ENST00000474572 ESCO2Q56NI9 601 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 C6orf183Q5T699 404 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 SLC22A25Q6T423 547 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 ACOT7LQ6ZUV0 252 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 KCTD9Q7L273 389 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 GCNT2Q8N0V5 402 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 OR8H3Q8N146 312 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 C17orf78Q8N4C9 275 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 WDR31Q8NA23 367 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 POC1AQ8NBT0 407 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 DYRK2Q92630 601 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 EXTL1Q92935 676 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 MOB3AQ96BX8 217 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 PIK3IP1Q96FE7 263 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 GALNT14Q96FL9 552 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 SEC22AQ96IW7 307 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 HS3ST6Q96QI5 342 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 OR51I2Q9H344 312 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 CDH20Q9HBT6 801 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 CHMP1AQ9HD42 196 aaPredicted RBP8.39□□□□□ -1.07
USP39-214ENST00000474572 OBP2BQ9NPH6 170 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 DKK4Q9UBT3 224 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 SSUH2Q9Y2M2 353 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 WDFY4Q6ZS81 3184 aa8.39□□□□□ -1.07
USP39-214ENST00000474572 CACNA1GO43497 2377 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 BCL2L11O43521 198 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 TNFSF13O75888 250 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 LYZL6O75951 148 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 IFNA2P01563 188 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 IGLV1-44P01699 117 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 CELA3BP08861 270 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 ACAA1P09110 424 aaPredicted RBP8.38□□□□□ -1.07
USP39-214ENST00000474572 RRASP10301 218 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 RAC2P15153 192 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 SELEP16581 610 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 PI3P19957 117 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 TUBG1P23258 451 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 PSMB6P28072 239 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 ERVK11-1P61568 191 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 PPP1CBP62140 327 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 SHEQ5VZ18 495 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 OR2T2Q6IF00 324 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 VWA1Q6PCB0 445 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 ZNF880Q6PDB4 577 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 SGPP2Q8IWX5 399 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 FAM169BQ8N8A8 192 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 LRTM2Q8N967 370 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 C2orf50Q96LR7 162 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms