RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 CCDC160A6NGH7 325 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 GABRPO00591 440 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 NDUFA2O43678 99 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 ANGPTL7O43827 346 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 GABARAPO95166 117 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 FSHBP01225 129 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 UCHL1P09936 223 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 CALCBP10092 127 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 IGFBP3P17936 291 aaPredicted RBP10.85□□□□□ -0.67
TPM3-216ENST00000473036 SRMP19623 302 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 BCL3P20749 454 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 PRKACBP22694 351 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 CPT2P23786 658 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 TGFBR2P37173 567 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 RBP2P50120 134 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 CAPZA1P52907 286 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 MTCP1P56278 107 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 RPS25P62851 125 aaKnown RBP10.85□□□□□ -0.67
TPM3-216ENST00000473036 FABP5Q01469 135 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 DCAF12L2Q5VW00 463 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 C1QL2Q7Z5L3 287 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 OR52N4Q8NGI2 321 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 OR5D18Q8NGL1 313 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 SPSB1Q96BD6 273 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 TMIGD2Q96BF3 282 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 DERL3Q96Q80 235 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 OR14A2Q96R54 314 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 PPIL3Q9H2H8 161 aaKnown RBP10.85□□□□□ -0.67
TPM3-216ENST00000473036 RBFOX1Q9NWB1 397 aaKnown RBP10.85□□□□□ -0.67
TPM3-216ENST00000473036 DNAJB11Q9UBS4 358 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 MEGF8Q7Z7M0 2845 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 DSCAML1Q8TD84 2053 aa10.85□□□□□ -0.67
TPM3-216ENST00000473036 A0A0G2JMP0 313 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 LOC100506127A0A0U1RQW1 187 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 A0A0X1KG70 313 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 KIR2DS1A0A191URI9 304 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 RFPL4AA6NLU0 287 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 RFPL4AL1F8VTS6 287 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 SULT1B1O43704 296 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 FSTP19883 344 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 RAB3AP20336 220 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 GADD45AP24522 165 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 MTNR1BP49286 362 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 ATP1B3P54709 279 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 PDZK1IP1Q13113 114 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 IKZF1Q13422 519 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 KISS1Q15726 138 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 KCNJ8Q15842 424 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 KLF17Q5JT82 389 aaPredicted RBP10.84□□□□□ -0.67
TPM3-216ENST00000473036 LHFPL2Q6ZUX7 228 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 USP43Q70EL4 1123 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 BTN2A1Q7KYR7 527 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 NLRC3Q7RTR2 1065 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 NKAIN3Q8N8D7 197 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 ZNRF1Q8ND25 227 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 OR4M2Q8NGB6 313 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 RAB40AQ8WXH6 277 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 SDSLQ96GA7 329 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 CHCHD6Q9BRQ6 235 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 C7orf69Q9H7B7 122 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 ELL3Q9HB65 397 aaPredicted RBP10.84□□□□□ -0.67
TPM3-216ENST00000473036 TMEM138Q9NPI0 162 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 TXNL4BQ9NX01 149 aaKnown RBP10.84□□□□□ -0.67
TPM3-216ENST00000473036 RASL12Q9NYN1 266 aa10.84□□□□□ -0.67
TPM3-216ENST00000473036 RSL24D1Q9UHA3 163 aaKnown RBP10.84□□□□□ -0.67
TPM3-216ENST00000473036 SIGLEC5O15389 551 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 TCF21O43680 179 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 NXPH2O95156 264 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 IL1AP01583 271 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 ALDOBP05062 364 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 SFTPBP07988 381 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 CALRP27797 417 aaKnown RBP10.83□□□□□ -0.68
TPM3-216ENST00000473036 GABRA2P47869 451 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 POU3F4P49335 361 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 FAM27D1Q5T7N8 215 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 TMEM91Q6ZNR0 172 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 LYPD6Q86Y78 171 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 LY6G5BQ8NDX9 201 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 ZFAND2BQ8WV99 257 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 ST8SIA4Q92187 359 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 CEP19Q96LK0 163 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 NUDT16L1Q9BRJ7 211 aaKnown RBP10.83□□□□□ -0.68
TPM3-216ENST00000473036 MRI1Q9BV20 369 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 DNTTIP1Q9H147 329 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 OR51E2Q9H255 320 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 NOX4Q9NPH5 578 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 PCDHB16Q9NRJ7 776 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 OR5V1Q9UGF6 321 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 POLDIP2Q9Y2S7 368 aa10.83□□□□□ -0.68
TPM3-216ENST00000473036 SOX21Q9Y651 276 aaPredicted RBP10.83□□□□□ -0.68
TPM3-216ENST00000473036 A0A0A6YYJ9 748 aa10.82□□□□□ -0.68
TPM3-216ENST00000473036 DPPA5A6NC42 116 aa10.82□□□□□ -0.68
TPM3-216ENST00000473036 J3QLI3 93 aa10.82□□□□□ -0.68
TPM3-216ENST00000473036 MMP9P14780 707 aa10.82□□□□□ -0.68
TPM3-216ENST00000473036 GATA3P23771 443 aa10.82□□□□□ -0.68
TPM3-216ENST00000473036 DUSP1P28562 367 aa10.82□□□□□ -0.68
TPM3-216ENST00000473036 PRDX2P32119 198 aa10.82□□□□□ -0.68
TPM3-216ENST00000473036 SOX6P35712 828 aa10.82□□□□□ -0.68
TPM3-216ENST00000473036 NPY4RP50391 375 aa10.82□□□□□ -0.68
TPM3-216ENST00000473036 SMIM21Q3B7S5 101 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms