RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 RFT1Q96AA3 541 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 SPSB1Q96BD6 273 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 SNX22Q96L94 193 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 OPALINQ96PE5 141 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 SLC29A1Q99808 456 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 C9orf16Q9BUW7 83 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 SEBOXQ9HB31 216 aaPredicted RBP7.32□□□□□ -1.24
USF1-204ENST00000472217 TCF7L1Q9HCS4 588 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 HHLA2Q9UM44 414 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 PKD1L1Q8TDX9 2849 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 IGKV1-12A0A0C4DH73 117 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 MEGF11A6BM72 1044 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 FAM90A8PA6NJQ4 464 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 ODF3BA8MYP8 253 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 M0QZ24 198 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 CHST1O43916 411 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 PSPNO60542 156 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 FADS2O95864 444 aaKnown RBP7.31□□□□□ -1.24
USF1-204ENST00000472217 IGKV1D-12P01611 117 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 OCM2P0CE71 109 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 OCMP0CE72 109 aaPredicted RBP7.31□□□□□ -1.24
USF1-204ENST00000472217 IGHV1-8P0DP01 117 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 PRKACAP17612 351 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 GABRR1P24046 479 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 PEX2P28328 305 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 GABRA5P31644 462 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 MEF2CQ06413 473 aaPredicted RBP7.31□□□□□ -1.24
USF1-204ENST00000472217 PDZK1IP1Q13113 114 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 GALEQ14376 348 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 ZNF146Q15072 292 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 GRK1Q15835 563 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 SPIN3Q5JUX0 258 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 LDLRAD2Q5SZI1 272 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 ZBTB49Q6ZSB9 765 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 LHFPL3Q86UP9 236 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 C10orf67Q8IYJ2 551 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 DYNAPQ8N1N2 210 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 SYS1Q8N2H4 156 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 PQLC1Q8N2U9 271 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 ZNF676Q8N7Q3 588 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 OR13D1Q8NGV5 346 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 RHOXF1Q8NHV9 184 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 PIFOQ8TCI5 191 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 MRPL48Q96GC5 212 aaKnown RBP7.31□□□□□ -1.24
USF1-204ENST00000472217 ZNF714Q96N38 554 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 SPACA5Q96QH8 159 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 ZNF649Q9BS31 505 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 ALG8Q9BVK2 526 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 CHST6Q9GZX3 395 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 ISG20L2Q9H9L3 353 aaKnown RBP7.31□□□□□ -1.24
USF1-204ENST00000472217 S100A14Q9HCY8 104 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 HMG20AQ9NP66 347 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 AMBNQ9NP70 447 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 FAM118AQ9NWS6 357 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 ERVK13-1Q9NX77 482 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 FBLN5Q9UBX5 448 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 SIGLEC9Q9Y336 463 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 LINC00312Q9Y6C7 94 aa7.31□□□□□ -1.24
USF1-204ENST00000472217 LOC100130705A0A1B0GUX0 176 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 hADV38S2A0JD32 116 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 VGLL3A8MV65 326 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 E9PI62 339 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 SIRPB1O00241 398 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 MPZL2O60487 215 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 ZFPL1O95159 310 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 TSPAN15O95858 294 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 MT-ND2P03891 347 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 ARG1P05089 322 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 OR3A1P47881 315 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 RAB40BQ12829 278 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 PLA1AQ53H76 456 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 ZNF626Q68DY1 528 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 OR4S1Q8NGB4 309 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 OR11H6Q8NGC7 330 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 OR5D18Q8NGL1 313 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 OR4C13Q8NGP0 309 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 APH1BQ8WW43 257 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 Q96MT0 163 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 MMP27Q9H306 513 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 ZCCHC4Q9H5U6 513 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 NEK6Q9HC98 313 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 RAB18Q9NP72 206 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 EXOSC4Q9NPD3 245 aaKnown RBP7.3□□□□□ -1.24
USF1-204ENST00000472217 GSTK1Q9Y2Q3 226 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 TBL2Q9Y4P3 447 aaKnown RBP7.3□□□□□ -1.24
USF1-204ENST00000472217 DSCAML1Q8TD84 2053 aa7.3□□□□□ -1.24
USF1-204ENST00000472217 TMEM212A6NML5 194 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 EBAG9O00559 213 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 SH2D1BO14796 132 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 MGST3O14880 152 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 SULT1B1O43704 296 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 KDM4BO94953 1096 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 OR2H2O95918 312 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 HCKP08631 526 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 ERP29P30040 261 aaKnown RBP7.29□□□□□ -1.24
USF1-204ENST00000472217 KIR2DS4P43632 304 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 RAB13P51153 203 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 EFNB2P52799 333 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 P2RX3P56373 397 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 DEFA6Q01524 100 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms