RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 ODF3BA8MYP8 253 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 M0QZ24 198 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 HTR1AP08908 422 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 ZNF728P0DKX0 622 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 ZNF20P17024 532 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 PRKACAP17612 351 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 ATF1P18846 271 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 GABRR1P24046 479 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 RBP2P50120 134 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 RAB13P51153 203 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 MTCP1P56278 107 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 ACTC1P68032 377 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 ACTA1P68133 377 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 LRRC36Q1X8D7 754 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 TMEM244Q5VVB8 128 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 MEDAGQ5VYS4 303 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 FDX2Q6P4F2 183 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 GDPD3Q7L5L3 318 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 LHFPL3Q86UP9 236 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 ACBD7Q8N6N7 88 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 OR5D18Q8NGL1 313 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 AMBNQ9NP70 447 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 FOXJ3Q9UPW0 622 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 EXOGQ9Y2C4 368 aaKnown RBP12.43□□□□□ -0.42
COL1A1-203ENST00000471344 GMPPBQ9Y5P6 360 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 TRBV2A0A0J9YWF9 115 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 FAM90A8PA6NJQ4 464 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 E9PI62 339 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 TIMM23O14925 209 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 SERPINA3P01011 423 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 ARG1P05089 322 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 ISG15P05161 165 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 IGHV1-8P0DP01 117 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 DBTP11182 482 aaKnown RBP12.42□□□□□ -0.42
COL1A1-203ENST00000471344 GABRA5P31644 462 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 ATP1B3P54709 279 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 GRK1Q15835 563 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 CCBE1Q6UXH8 406 aaPredicted RBP12.42□□□□□ -0.42
COL1A1-203ENST00000471344 BAIAP2L2Q6UXY1 529 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 ZBTB49Q6ZSB9 765 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 UTS2BQ765I0 119 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 KCTD20Q7Z5Y7 419 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 FAM58AQ8N1B3 248 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 C11orf44Q8N8P7 122 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 DNAAF1Q8NEP3 725 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 OR4S1Q8NGB4 309 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 OR13C3Q8NGS6 347 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 OR13C9Q8NGT0 318 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 SNX22Q96L94 193 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 OPALINQ96PE5 141 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 ZNF649Q9BS31 505 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 ALG8Q9BVK2 526 aa12.42□□□□□ -0.42
COL1A1-203ENST00000471344 hCG_1809904A0A1W2PP81 198 aa12.41□□□□□ -0.42
COL1A1-203ENST00000471344 A0A1W2PPE2 198 aa12.41□□□□□ -0.42
COL1A1-203ENST00000471344 A0A1W2PR64 198 aa12.41□□□□□ -0.42
COL1A1-203ENST00000471344 A0A1W2PRV1 198 aa12.41□□□□□ -0.42
COL1A1-203ENST00000471344 SIRPB1O00241 398 aa12.41□□□□□ -0.42
COL1A1-203ENST00000471344 MMP23AO75900 390 aa12.41□□□□□ -0.42
COL1A1-203ENST00000471344 OR3A1P47881 315 aa12.41□□□□□ -0.42
COL1A1-203ENST00000471344 EFNB2P52799 333 aa12.41□□□□□ -0.42
COL1A1-203ENST00000471344 LGALS4P56470 323 aa12.41□□□□□ -0.42
COL1A1-203ENST00000471344 PDZK1IP1Q13113 114 aa12.41□□□□□ -0.42
COL1A1-203ENST00000471344 ALKBH1Q13686 389 aaKnown RBP12.41□□□□□ -0.42
COL1A1-203ENST00000471344 HABP2Q14520 560 aaPredicted RBP12.41□□□□□ -0.42
COL1A1-203ENST00000471344 ZNF626Q68DY1 528 aa12.41□□□□□ -0.42
COL1A1-203ENST00000471344 TMEM219Q86XT9 240 aa12.41□□□□□ -0.42
COL1A1-203ENST00000471344 ZNF714Q96N38 554 aa12.41□□□□□ -0.42
COL1A1-203ENST00000471344 NKX3-1Q99801 234 aaPredicted RBP12.41□□□□□ -0.42
COL1A1-203ENST00000471344 MMP27Q9H306 513 aa12.41□□□□□ -0.42
COL1A1-203ENST00000471344 FBLN5Q9UBX5 448 aa12.41□□□□□ -0.42
COL1A1-203ENST00000471344 HHLA2Q9UM44 414 aa12.41□□□□□ -0.42
COL1A1-203ENST00000471344 TET2Q6N021 2002 aaPredicted RBP12.4□□□□□ -0.42
COL1A1-203ENST00000471344 SNTNA6NMZ2 147 aa12.4□□□□□ -0.42
COL1A1-203ENST00000471344 CCR9P51686 369 aa12.4□□□□□ -0.42
COL1A1-203ENST00000471344 DYNC1I2Q13409 638 aaKnown RBP12.4□□□□□ -0.42
COL1A1-203ENST00000471344 GALEQ14376 348 aa12.4□□□□□ -0.42
COL1A1-203ENST00000471344 ZNF146Q15072 292 aa12.4□□□□□ -0.42
COL1A1-203ENST00000471344 FAM189A2Q15884 450 aa12.4□□□□□ -0.42
COL1A1-203ENST00000471344 SSX2Q16385 188 aa12.4□□□□□ -0.42
COL1A1-203ENST00000471344 LHFPL2Q6ZUX7 228 aa12.4□□□□□ -0.42
COL1A1-203ENST00000471344 ZNF676Q8N7Q3 588 aa12.4□□□□□ -0.42
COL1A1-203ENST00000471344 OR4C13Q8NGP0 309 aa12.4□□□□□ -0.42
COL1A1-203ENST00000471344 OR13D1Q8NGV5 346 aa12.4□□□□□ -0.42
COL1A1-203ENST00000471344 RHOXF1Q8NHV9 184 aa12.4□□□□□ -0.42
COL1A1-203ENST00000471344 FAM110DQ8TAY7 271 aaPredicted RBP12.4□□□□□ -0.42
COL1A1-203ENST00000471344 APH1BQ8WW43 257 aa12.4□□□□□ -0.42
COL1A1-203ENST00000471344 SPSB1Q96BD6 273 aa12.4□□□□□ -0.42
COL1A1-203ENST00000471344 HMG20AQ9NP66 347 aa12.4□□□□□ -0.42
COL1A1-203ENST00000471344 GSTK1Q9Y2Q3 226 aa12.4□□□□□ -0.42
COL1A1-203ENST00000471344 ZFPL1O95159 310 aa12.39□□□□□ -0.43
COL1A1-203ENST00000471344 CLIC3O95833 236 aa12.39□□□□□ -0.43
COL1A1-203ENST00000471344 OR2H2O95918 312 aa12.39□□□□□ -0.43
COL1A1-203ENST00000471344 RBP4P02753 201 aa12.39□□□□□ -0.43
COL1A1-203ENST00000471344 PRKACBP22694 351 aa12.39□□□□□ -0.43
COL1A1-203ENST00000471344 ACTA2P62736 377 aa12.39□□□□□ -0.43
COL1A1-203ENST00000471344 ACTG2P63267 376 aa12.39□□□□□ -0.43
COL1A1-203ENST00000471344 MEF2CQ06413 473 aaPredicted RBP12.39□□□□□ -0.43
COL1A1-203ENST00000471344 AANATQ16613 207 aa12.39□□□□□ -0.43
COL1A1-203ENST00000471344 SMN1Q16637 294 aaKnown RBP12.39□□□□□ -0.43
COL1A1-203ENST00000471344 PDLIM3Q53GG5 364 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms