RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 TP53I11O14683 189 aa12.13□□□□□ -0.47
GPC1-208ENST00000469694 C1QL1O75973 258 aa12.13□□□□□ -0.47
GPC1-208ENST00000469694 BPNT1O95861 308 aa12.13□□□□□ -0.47
GPC1-208ENST00000469694 GLRA1P23415 457 aa12.13□□□□□ -0.47
GPC1-208ENST00000469694 SUMO3P55854 103 aaPredicted RBP12.13□□□□□ -0.47
GPC1-208ENST00000469694 NUTF2P61970 127 aaKnown RBP12.13□□□□□ -0.47
GPC1-208ENST00000469694 IAH1Q2TAA2 248 aaPredicted RBP12.13□□□□□ -0.47
GPC1-208ENST00000469694 TMEM176BQ3YBM2 270 aaPredicted RBP12.13□□□□□ -0.47
GPC1-208ENST00000469694 H1FNTQ75WM6 255 aaPredicted RBP12.13□□□□□ -0.47
GPC1-208ENST00000469694 OR5R1Q8NH85 324 aa12.13□□□□□ -0.47
GPC1-208ENST00000469694 M1APQ8TC57 530 aa12.13□□□□□ -0.47
GPC1-208ENST00000469694 ABHD6Q9BV23 337 aa12.13□□□□□ -0.47
GPC1-208ENST00000469694 TMEM9BQ9NQ34 198 aa12.13□□□□□ -0.47
GPC1-208ENST00000469694 EMC9Q9Y3B6 208 aa12.13□□□□□ -0.47
GPC1-208ENST00000469694 LOC101059948A0A1B0GTJ6 334 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 A8MWP6 167 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 SRSF10O75494 262 aaKnown RBP12.12□□□□□ -0.47
GPC1-208ENST00000469694 MT-CO3P00414 261 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 ISG15P05161 165 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 HES3Q5TGS1 186 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 LHFPL1Q86WI0 220 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 LINC00346Q8IVM7 164 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 MFSD8Q8NHS3 518 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 MRGPRX4Q96LA9 322 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 SMDT1Q9H4I9 107 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 P4HTMQ9NXG6 502 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 COA3Q9Y2R0 106 aaPredicted RBP12.12□□□□□ -0.47
GPC1-208ENST00000469694 A0A087WWC5 75 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 TRGC2P03986 189 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 IL2RGP31785 369 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 ERVFRD-1P60508 538 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 OR8G1Q15617 311 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 USF2Q15853 346 aaPredicted RBP12.12□□□□□ -0.47
GPC1-208ENST00000469694 AADACL3Q5VUY0 350 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 OR52N4Q8NGI2 321 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 OR13D1Q8NGV5 346 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 RAB24Q969Q5 203 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 GINS3Q9BRX5 216 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 STRAPQ9Y3F4 350 aaKnown RBP12.12□□□□□ -0.47
GPC1-208ENST00000469694 R4GMQ9 66 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 URB1O60287 2271 aaKnown RBP12.12□□□□□ -0.47
GPC1-208ENST00000469694 NPIPA5E9PKD4 350 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 PRH1P02810 166 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 CYC1P08574 325 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 TAGLN2P37802 199 aaKnown RBP12.12□□□□□ -0.47
GPC1-208ENST00000469694 MLF1P58340 268 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 HSF1Q00613 529 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 PCK2Q16822 640 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 OR2T2Q6IF00 324 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 ZNF248Q8NDW4 579 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 OR13G1Q8NGZ3 307 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 OR6X1Q8NH79 312 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 RAB39BQ96DA2 213 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 BSCL2Q96G97 398 aaPredicted RBP12.12□□□□□ -0.47
GPC1-208ENST00000469694 RARRES2Q99969 163 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 NICN1Q9BSH3 213 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 NELFAQ9H3P2 528 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 CHST11Q9NPF2 352 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 G6PC2Q9NQR9 355 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 B3GAT1Q9P2W7 334 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 NPIPA1Q9UND3 350 aa12.12□□□□□ -0.47
GPC1-208ENST00000469694 ZNF318Q5VUA4 2279 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 IGLV3-32A0A0A0MS00 114 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 IGLV1-36A0A0B4J1U3 117 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 H3BQ15 152 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 MSX1P28360 303 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 HSD11B1P28845 292 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 HIKESHIQ53FT3 197 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 DPPA2Q7Z7J5 298 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 LFNGQ8NES3 379 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 CA5BP1Q8WTZ4 195 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 SPRY4Q9C004 299 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 PLEKHA2Q9HB19 425 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 WFDC1Q9HC57 220 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 SERINC1Q9NRX5 453 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 TUBD1Q9UJT1 453 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 TGIF2-C20orf24A0A0A6YYL0 155 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 PPP1CCP36873 323 aaKnown RBP12.11□□□□□ -0.47
GPC1-208ENST00000469694 BIDP55957 195 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 NHLH2Q02577 135 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 FADS6Q8N9I5 356 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 SUMF1Q8NBK3 374 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 ABHD5Q8WTS1 349 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 PACRGQ96M98 296 aaPredicted RBP12.11□□□□□ -0.47
GPC1-208ENST00000469694 PARD6AQ9NPB6 346 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 OR52A1Q9UKL2 312 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 OSGIN2Q9Y236 505 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 KCNIP3Q9Y2W7 256 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 URGCP-MRPS24S4R325 110 aa12.11□□□□□ -0.47
GPC1-208ENST00000469694 BORCS7-ASMTA0A0B4J1R7 106 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 IGHV3-15A0A0B4J1V0 119 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 TMEM14DPA8MWL7 114 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 ETV2O00321 342 aaPredicted RBP12.1□□□□□ -0.47
GPC1-208ENST00000469694 GALR2O43603 387 aaPredicted RBP12.1□□□□□ -0.47
GPC1-208ENST00000469694 CHRM2P08172 466 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 SNRPCP09234 159 aaKnown RBP12.1□□□□□ -0.47
GPC1-208ENST00000469694 TRGC1P0CF51 173 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 PLAC9Q5JTB6 97 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 CDCP2Q5VXM1 449 aa12.1□□□□□ -0.47
GPC1-208ENST00000469694 RAET1LQ5VY80 246 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms