RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 M0QYV0 167 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 M0R3G1 203 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 PSMD12O00232 456 aaPredicted RBP2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 TPST1O60507 370 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 RAD1O60671 282 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 GGCTO75223 188 aaKnown RBP2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 SLC22A5O76082 557 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 LSM8O95777 96 aaKnown RBP2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 IFNA21P01568 189 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 HBE1P02100 147 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 EIF4EP06730 217 aaKnown RBP2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 MRPL3P09001 348 aaKnown RBP2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 TSPAN19P0C672 248 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 SCGB1A1P11684 91 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 IFI30P13284 250 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 ME2P23368 584 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 SSTR5P35346 364 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 MAGEA12P43365 314 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 KCNJ3P48549 501 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 PSMD8P48556 350 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 DAOAP59103 153 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 DEFA1P59665 94 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 DEFA3P59666 94 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 SNAP25P60880 206 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 RAB2AP61019 212 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 RAB11AP62491 216 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 PRR3P79522 188 aaKnown RBP2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 TFAMQ00059 246 aaKnown RBP2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 PITPNAQ00169 270 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 TNFRSF9Q07011 255 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 SYCNQ0VAF6 134 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 BNIP2Q12982 314 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 EIF4EBP1Q13541 118 aaPredicted RBP2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 SPA17Q15506 151 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 SLC9A3R2Q15599 337 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 VAMP3Q15836 100 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 RAB11BQ15907 218 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 C5orf64Q2M2E5 130 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 DEFB115Q30KQ5 88 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 N4BP2L1Q5TBK1 243 aaPredicted RBP2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 FBXW9Q5XUX1 488 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 CLEC18BQ6UXF7 455 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 CD300LGQ6UXG3 332 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 CYHR1Q6ZMK1 362 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 TMED4Q7Z7H5 227 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 PHF13Q86YI8 300 aaPredicted RBP2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 RIMKLAQ8IXN7 391 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 CBR4Q8N4T8 237 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 PQLC3Q8N755 202 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 OR5T3Q8NGG3 340 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 OR52E2Q8NGJ4 325 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 OR2V1Q8NHB1 315 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 COQ8AQ8NI60 647 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 OR51E1Q8TCB6 317 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 GPX8Q8TED1 209 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 C16orf78Q8WTQ4 265 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 C15orf40Q8WUR7 153 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 SFT2D1Q8WV19 159 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 C1orf54Q8WWF1 131 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 NARS2Q96I59 477 aaKnown RBP2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 CNBD2Q96M20 576 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 GLT1D1Q96MS3 346 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 MBOAT7Q96N66 472 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 RBBP8Q99708 897 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 NAPGQ99747 312 aaPredicted RBP2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 ANKRD60Q9BZ19 345 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 ULBP1Q9BZM6 244 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 RAB1BQ9H0U4 201 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 ELOVL6Q9H5J4 265 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 TMEM38AQ9H6F2 299 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 ARMC7Q9H6L4 198 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 ABCB9Q9NP78 766 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 CYTL1Q9NRR1 136 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 NECAP2Q9NVZ3 263 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 BABAM2Q9NXR7 383 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 OR52A1Q9UKL2 312 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 TBC1D24Q9ULP9 559 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 FLVCR2Q9UPI3 526 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 ZNF609O15014 1411 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 YTHDC2Q9H6S0 1430 aaKnown RBP2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 ADGRL3Q9HAR2 1447 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 OBSCNQ5VST9 7968 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 AK9Q5TCS8 1911 aa2.23□□□□□ -2.05
HMGXB4-205ENST00000464480 POLR1AO95602 1720 aaPredicted RBP2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 MYO10Q9HD67 2058 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 AQRO60306 1485 aaKnown RBP eCLIP2.22□□□□□ -2.052e-9■■■■■ 47.9
HMGXB4-205ENST00000464480 KCNE1BA0A087WTH5 132 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 TRAV25A0A0B4J276 109 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 A0A1B0GW15 77 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 A6NDN8 102 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 NCBP2LA6PVI3 153 aaKnown RBP2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 CLDN25C9JDP6 229 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 M0R036 132 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 DFFAO00273 331 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 CDIPTO14735 213 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 BCKDKO14874 412 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 RBFOX2O43251 390 aaKnown RBP eCLIP2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 DLEU1O43261 78 aa2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 POP7O75817 140 aaKnown RBP2.22□□□□□ -2.05
HMGXB4-205ENST00000464480 ZMPSTE24O75844 475 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms