RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 SNX29P2Q8IUI4 249 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 POC1AQ8NBT0 407 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 KCNG3Q8TAE7 436 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 Q96M66 194 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 SDHCQ99643 169 aaPredicted RBP9.23□□□□□ -0.93
SCN9A-205ENST00000454569 SRRQ9GZT4 340 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 ZMAT3Q9HA38 289 aaKnown RBP9.23□□□□□ -0.93
SCN9A-205ENST00000454569 SAP30LQ9HAJ7 183 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 HES4Q9HCC6 221 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 IL36GQ9NZH8 169 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 RAB22AQ9UL26 194 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 PPP1R3CQ9UQK1 317 aa9.23□□□□□ -0.93
SCN9A-205ENST00000454569 MED13LQ71F56 2210 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 A0A0G2JMP0 313 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 A0A0X1KG70 313 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 TMEM238LA0A1B0GVL6 79 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 OVOL3O00110 214 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 NOS1APO75052 506 aaPredicted RBP9.22□□□□□ -0.93
SCN9A-205ENST00000454569 GOSR1O95249 250 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 UBBP0CG47 229 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 PRKACAP17612 351 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 AMY2BP19961 511 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 PTH2RP49190 550 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 PYDC2Q56P42 97 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 PLAC9Q5JTB6 97 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 FAM209AQ5JX71 171 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 ELP2Q6IA86 826 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 ACP7Q6ZNF0 438 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 OR2W3Q7Z3T1 314 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 FAM58AQ8N1B3 248 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 OSR2Q8N2R0 312 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 FAM89BQ8N5H3 189 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 OR4M2Q8NGB6 313 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 OR51T1Q8NGJ9 327 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 ABHD1Q96SE0 405 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 DIRC2Q96SL1 478 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 S100A13Q99584 98 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 TM2D1Q9BX74 207 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 TMEM59Q9BXS4 323 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 DECR2Q9NUI1 292 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 GHRLQ9UBU3 117 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 ST3GAL6Q9Y274 331 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 KCNK7Q9Y2U2 307 aa9.22□□□□□ -0.93
SCN9A-205ENST00000454569 A0A1B0GW55 424 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 SRRM5B3KS81 715 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 HLA-DQB1P01920 261 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 CSTBP04080 98 aaKnown RBP9.21□□□□□ -0.93
SCN9A-205ENST00000454569 ACAA1P09110 424 aaPredicted RBP9.21□□□□□ -0.93
SCN9A-205ENST00000454569 DUX4L2P0CJ85 424 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 DUX4L3P0CJ86 424 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 DUX4L4P0CJ87 422 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 DUX4L5P0CJ88 424 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 DUX4L6P0CJ89 424 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 DUX4L7P0CJ90 424 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 RAB6AP20340 208 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 TNFSF4P23510 183 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 GABRR1P24046 479 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 CFHR2P36980 270 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 RBM11P57052 281 aaKnown RBP9.21□□□□□ -0.93
SCN9A-205ENST00000454569 FGF12P61328 243 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 IFITM3Q01628 133 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 TESK1Q15569 626 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 RGS21Q2M5E4 152 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 Q6P435 159 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 DUX4L9Q6RFH8 374 aaPredicted RBP9.21□□□□□ -0.93
SCN9A-205ENST00000454569 BAIAP2L2Q6UXY1 529 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 LYSMD2Q8IV50 215 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 OR8H2Q8N162 312 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 GDPD1Q8N9F7 314 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 Q8TCH9 128 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 CCL17Q92583 94 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 DYRK2Q92630 601 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 EMG1Q92979 244 aaKnown RBP9.21□□□□□ -0.93
SCN9A-205ENST00000454569 PTX4Q96A99 478 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 FN3KRPQ9HA64 309 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 FAIMQ9NVQ4 179 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 DUX4Q9UBX2 424 aa9.21□□□□□ -0.93
SCN9A-205ENST00000454569 PDZD2O15018 2839 aa9.21□□□□□ -0.94
SCN9A-205ENST00000454569 TRAV18A0A075B6X5 111 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 IGHV1-69-2A0A0G2JMI3 117 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 MEIOCA2RUB1 952 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 TMEM178BH3BS89 294 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 NXPH2O95156 264 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 GTF2F2P13984 249 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 GLRA1P23415 457 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 PITPNBP48739 271 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 CAPZA1P52907 286 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 TAS2R20P59543 309 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 SCN1BQ07699 218 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 MZT1Q08AG7 82 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 PCGF3Q3KNV8 242 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 STEAP3Q658P3 488 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 CDH24Q86UP0 819 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 CD177Q8N6Q3 437 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 DEFB108BQ8NET1 73 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 OR10Z1Q8NGY1 313 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 C14orf79Q96F83 325 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 CPNE2Q96FN4 548 aaPredicted RBP9.2□□□□□ -0.94
SCN9A-205ENST00000454569 ARHGAP5-AS1Q96IT6 56 aa9.2□□□□□ -0.94
SCN9A-205ENST00000454569 CST11Q9H112 138 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms