RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 ZNF728P0DKX0 622 aa7.22□□□□□ -1.25
HCG18-238ENST00000449544 OMGP23515 440 aa7.22□□□□□ -1.25
HCG18-238ENST00000449544 COL8A2P25067 703 aa7.22□□□□□ -1.25
HCG18-238ENST00000449544 BMI1P35226 326 aa7.22□□□□□ -1.25
HCG18-238ENST00000449544 LIMS1P48059 325 aa7.22□□□□□ -1.25
HCG18-238ENST00000449544 MVDP53602 400 aa7.22□□□□□ -1.25
HCG18-238ENST00000449544 MRPS11P82912 194 aaKnown RBP7.22□□□□□ -1.25
HCG18-238ENST00000449544 FGL1Q08830 312 aa7.22□□□□□ -1.25
HCG18-238ENST00000449544 MSMO1Q15800 293 aa7.22□□□□□ -1.25
HCG18-238ENST00000449544 SMN1Q16637 294 aaKnown RBP7.22□□□□□ -1.25
HCG18-238ENST00000449544 C4orf46Q504U0 113 aa7.22□□□□□ -1.25
HCG18-238ENST00000449544 PRSS27Q9BQR3 290 aa7.22□□□□□ -1.25
HCG18-238ENST00000449544 SOX7Q9BT81 388 aa7.22□□□□□ -1.25
HCG18-238ENST00000449544 TRAF4Q9BUZ4 470 aaPredicted RBP7.22□□□□□ -1.25
HCG18-238ENST00000449544 EHFQ9NZC4 300 aa7.22□□□□□ -1.25
HCG18-238ENST00000449544 SHANK1Q9Y566 2161 aa7.22□□□□□ -1.25
HCG18-238ENST00000449544 ZSCAN5BA6NJL1 495 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 CTXN2P0C2S0 81 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 ACSM4P0C7M7 580 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 SLC2A2P11168 524 aaPredicted RBP7.21□□□□□ -1.25
HCG18-238ENST00000449544 CRYBB2P43320 205 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 REG1BP48304 166 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 MTNR1BP49286 362 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 ZNF695Q8IW36 515 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 OR51D1Q8NGF3 324 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 FCAMRQ8WWV6 532 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 FOXC2Q99958 501 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 TUBA4BQ9H853 241 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 PSG11Q9UQ72 335 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 MAST4O15021 2626 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 PRUNE2Q8WUY3 3088 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 ARPC4-TTLL3A0A0A6YYG9 625 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 SSNA1O43805 119 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 CLPSP04118 112 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 RAB7AP51149 207 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 ZMYND11Q15326 602 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 GUCA2BQ16661 112 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 CEACAM21Q3KPI0 293 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 PRAMEF5Q5TYX0 476 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 ZNF324BQ6AW86 544 aaPredicted RBP7.21□□□□□ -1.25
HCG18-238ENST00000449544 FAM216BQ8N7L0 139 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 CLEC7AQ9BXN2 247 aa7.21□□□□□ -1.25
HCG18-238ENST00000449544 FREM3P0C091 2139 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 DSPPQ9NZW4 1301 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 CFAP46Q8IYW2 2715 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 IGHV4-30-2A0A087WSY4 118 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 TRBV5-3A0A0A0MS03 114 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 FAM240BA0A1B0GVZ2 78 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 ARRDC5A6NEK1 342 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 HMGB3O15347 200 aaKnown RBP7.21□□□□□ -1.26
HCG18-238ENST00000449544 IFNA4P05014 189 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 ACTBP60709 375 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 AESQ08117 197 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 FBXL19-AS1Q494R0 122 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 CCDC58Q4VC31 144 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 WDR38Q5JTN6 314 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 PCSK4Q6UW60 755 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 GDPGP1Q6ZNW5 385 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 TMEM123Q8N131 208 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 ZIC4Q8N9L1 334 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 POM121L2Q96KW2 1035 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 SLC29A1Q99808 456 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 ZMAT3Q9HA38 289 aaKnown RBP7.21□□□□□ -1.26
HCG18-238ENST00000449544 PATZ1Q9HBE1 687 aaKnown RBP7.21□□□□□ -1.26
HCG18-238ENST00000449544 PARP11Q9NR21 331 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 COA4Q9NYJ1 87 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 SSUH2Q9Y2M2 353 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 NPIPB13A6NJU9 1138 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 NPIPB4C9JG80 1138 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 OR8U9P0C7N5 309 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 LUMP51884 338 aaPredicted RBP7.21□□□□□ -1.26
HCG18-238ENST00000449544 UBE2UQ5VVX9 321 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 C10orf111Q8N326 155 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 ARHGEF39Q8N4T4 335 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 OR8U1Q8NH10 309 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 FAM110DQ8TAY7 271 aaPredicted RBP7.21□□□□□ -1.26
HCG18-238ENST00000449544 SGK3Q96BR1 496 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 TSNAXQ99598 290 aaKnown RBP7.21□□□□□ -1.26
HCG18-238ENST00000449544 IL36GQ9NZH8 169 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 GSKIPQ9P0R6 139 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 CYB5R1Q9UHQ9 305 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 RNF114Q9Y508 228 aa7.21□□□□□ -1.26
HCG18-238ENST00000449544 RPL36A-HNRNPH2H7BZ11 118 aa7.2□□□□□ -1.26
HCG18-238ENST00000449544 CLDN1O95832 211 aa7.2□□□□□ -1.26
HCG18-238ENST00000449544 ALPLP05186 524 aa7.2□□□□□ -1.26
HCG18-238ENST00000449544 HACD4Q5VWC8 232 aa7.2□□□□□ -1.26
HCG18-238ENST00000449544 FBXW12Q6X9E4 464 aa7.2□□□□□ -1.26
HCG18-238ENST00000449544 ZNF709Q8N972 641 aa7.2□□□□□ -1.26
HCG18-238ENST00000449544 OR51H1Q8NH63 302 aa7.2□□□□□ -1.26
HCG18-238ENST00000449544 SNX22Q96L94 193 aa7.2□□□□□ -1.26
HCG18-238ENST00000449544 C20orf24Q9BUV8 137 aa7.2□□□□□ -1.26
HCG18-238ENST00000449544 THYN1Q9P016 225 aa7.2□□□□□ -1.26
HCG18-238ENST00000449544 RAB22AQ9UL26 194 aa7.2□□□□□ -1.26
HCG18-238ENST00000449544 CENPEQ02224 2701 aa7.2□□□□□ -1.26
HCG18-238ENST00000449544 IGHV3-72A0A0B4J1Y9 119 aa7.2□□□□□ -1.26
HCG18-238ENST00000449544 DSCAMO60469 2012 aa7.2□□□□□ -1.26
HCG18-238ENST00000449544 SUB1P53999 127 aaKnown RBP eCLIP7.2□□□□□ -1.26
HCG18-238ENST00000449544 FOXL1Q12952 345 aa7.2□□□□□ -1.26
HCG18-238ENST00000449544 USP43Q70EL4 1123 aa7.2□□□□□ -1.26
HCG18-238ENST00000449544 ABHD12Q8N2K0 398 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms