RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 OR5T2Q8NGG2 359 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 OR56B1Q8NGI3 324 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 IGFBPL1Q8WX77 278 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 RDH5Q92781 318 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 DIABLOQ9NR28 239 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 UNC79Q9P2D8 2635 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 PLEKHA6Q9Y2H5 1048 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 MRPS7Q9Y2R9 242 aaKnown RBP12.29□□□□□ -0.44
TNF-208ENST00000449264 APCP25054 2843 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 CSMD2Q7Z408 3487 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 FABP12A6NFH5 140 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 TFF1P04155 84 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 ZNF44P15621 663 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 BLVRBP30043 206 aaPredicted RBP12.29□□□□□ -0.44
TNF-208ENST00000449264 FAM189A2Q15884 450 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 NHLRC3Q5JS37 347 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 ATAD3CQ5T2N8 411 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 OR10R2Q8NGX6 335 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 CYYR1Q96J86 154 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 ZMAT3Q9HA38 289 aaKnown RBP12.29□□□□□ -0.44
TNF-208ENST00000449264 RASL12Q9NYN1 266 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 NLKQ9UBE8 527 aa12.29□□□□□ -0.44
TNF-208ENST00000449264 TRAV18A0A075B6X5 111 aa12.28□□□□□ -0.44
TNF-208ENST00000449264 OOEPA6NGQ2 149 aa12.28□□□□□ -0.44
TNF-208ENST00000449264 IFNL4K9M1U5 179 aa12.28□□□□□ -0.44
TNF-208ENST00000449264 RAB27BO00194 218 aa12.28□□□□□ -0.44
TNF-208ENST00000449264 SIRPB1O00241 398 aa12.28□□□□□ -0.44
TNF-208ENST00000449264 HSPB6O14558 160 aa12.28□□□□□ -0.44
TNF-208ENST00000449264 SCGNO76038 276 aa12.28□□□□□ -0.44
TNF-208ENST00000449264 CHRM2P08172 466 aa12.28□□□□□ -0.44
TNF-208ENST00000449264 EFNA4P52798 201 aa12.28□□□□□ -0.44
TNF-208ENST00000449264 TAS2R20P59543 309 aa12.28□□□□□ -0.44
TNF-208ENST00000449264 IL13RA2Q14627 380 aa12.28□□□□□ -0.44
TNF-208ENST00000449264 MICBQ29980 383 aa12.28□□□□□ -0.44
TNF-208ENST00000449264 SPIN3Q5JUX0 258 aa12.28□□□□□ -0.44
TNF-208ENST00000449264 RAB12Q6IQ22 244 aa12.28□□□□□ -0.44
TNF-208ENST00000449264 LINC00299Q6ZSB3 139 aa12.28□□□□□ -0.44
TNF-208ENST00000449264 SNX29P2Q8IUI4 249 aa12.28□□□□□ -0.44
TNF-208ENST00000449264 RAB3CQ96E17 227 aa12.28□□□□□ -0.44
TNF-208ENST00000449264 AKIP1Q9NQ31 210 aa12.28□□□□□ -0.44
TNF-208ENST00000449264 DLL4Q9NR61 685 aa12.28□□□□□ -0.44
TNF-208ENST00000449264 V9GYH0 126 aa12.28□□□□□ -0.44
TNF-208ENST00000449264 NAV2Q8IVL1 2488 aa12.27□□□□□ -0.44
TNF-208ENST00000449264 PPIAL4EA0A075B759 164 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 A0A0G2JMP0 313 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 A0A0X1KG70 313 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 RFPL4AA6NLU0 287 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 OR2AT4A6NND4 320 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 CLDN25C9JDP6 229 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 PPIAL4DF5H284 164 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 RFPL4AL1F8VTS6 287 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 XRCC3O43542 346 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 RP2O75695 350 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 HAND1O96004 215 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 F12P00748 615 aaPredicted RBP12.27□□□□□ -0.45
TNF-208ENST00000449264 KNG1P01042 644 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 IGHV4-39P01824 125 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 PPIAL4FP0DN26 164 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 PTHLHP12272 177 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 GNB3P16520 340 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 GABRA2P47869 451 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 ZNF146Q15072 292 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 MPV17LQ2QL34 196 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 SIGIRRQ6IA17 410 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 BRICD5Q6PL45 260 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 LINC00596Q86U02 117 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 MFSD4AQ8N468 514 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 FAM89BQ8N5H3 189 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 OR4M2Q8NGB6 313 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 S100ZQ8WXG8 99 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 GCDHQ92947 438 aaPredicted RBP12.27□□□□□ -0.45
TNF-208ENST00000449264 ARHGAP5-AS1Q96IT6 56 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 NEDD4LQ96PU5 975 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 GLS2Q9UI32 602 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 WIPI2Q9Y4P8 454 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 PPIAL4AQ9Y536 164 aa12.27□□□□□ -0.45
TNF-208ENST00000449264 A0A0A6YYH2 397 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 A6NJ64 397 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 DEGS1O15121 323 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 OR2H2O95918 312 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 PSG2P11465 335 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 RNASE12Q5GAN4 147 aaKnown RBP12.26□□□□□ -0.45
TNF-208ENST00000449264 PLAC9Q5JTB6 97 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 Q6ZTK2 550 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 C6orf201Q7Z4U5 140 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 FAM90A1Q86YD7 464 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 PERPQ96FX8 193 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 PLEKHJ1Q9NW61 149 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 IGKV1D-17A0A075B6S4 117 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 ISPDA4D126 451 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 FAM90A10PA6NDY2 464 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 FAM90A18PA6NE21 464 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 FAM90A16PA6NEW6 464 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 TMEM235A6NFC5 223 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 FAM90A20PA6NIJ5 464 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 FAM90A8PA6NJQ4 464 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 FAM90A7PA6NKC0 464 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 FOXI3A8MTJ6 420 aaPredicted RBP12.26□□□□□ -0.45
TNF-208ENST00000449264 FAM90A22PA8MWA6 464 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 FAM90A12PA8MX19 464 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms