RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 RHOFQ9HBH0 211 aa15.04■□□□□ -0
TRAPPC4-203ENST00000447216 ZNF581Q9P0T4 197 aa15.04■□□□□ -0
TRAPPC4-203ENST00000447216 METRNQ9UJH8 293 aa15.04■□□□□ -0
TRAPPC4-203ENST00000447216 CSMD1Q96PZ7 3565 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 A0A1B0GW55 424 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 NDUFS8O00217 210 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 DUX4L2P0CJ85 424 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 DUX4L3P0CJ86 424 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 DUX4L4P0CJ87 422 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 DUX4L5P0CJ88 424 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 DUX4L6P0CJ89 424 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 DUX4L7P0CJ90 424 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 GTF2F2P13984 249 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 AMY2BP19961 511 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 NR4A2P43354 598 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 RBM11P57052 281 aaKnown RBP15.03■□□□□ -0
TRAPPC4-203ENST00000447216 SCN1BQ07699 218 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 DUX4L9Q6RFH8 374 aaPredicted RBP15.03■□□□□ -0
TRAPPC4-203ENST00000447216 OR2W3Q7Z3T1 314 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 CD177Q8N6Q3 437 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 OR51T1Q8NGJ9 327 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 ANGPTL6Q8NI99 470 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 KCNG3Q8TAE7 436 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 Q96MF0 132 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 CCL13Q99616 98 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 TMEM59Q9BXS4 323 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 CST11Q9H112 138 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 PCDHB16Q9NRJ7 776 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 CCDC59Q9P031 241 aaKnown RBP15.03■□□□□ -0
TRAPPC4-203ENST00000447216 DUX4Q9UBX2 424 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 ST3GAL6Q9Y274 331 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 ABCA2Q9BZC7 2435 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 VPS13CQ709C8 3753 aa15.03■□□□□ -0
TRAPPC4-203ENST00000447216 CEACAM18A8MTB9 384 aa15.02■□□□□ -0
TRAPPC4-203ENST00000447216 GEMIN2O14893 280 aaKnown RBP15.02■□□□□ -0
TRAPPC4-203ENST00000447216 HAND1O96004 215 aa15.02■□□□□ -0
TRAPPC4-203ENST00000447216 SELLP14151 372 aa15.02■□□□□ -0
TRAPPC4-203ENST00000447216 PRDX2P32119 198 aa15.02■□□□□ -0
TRAPPC4-203ENST00000447216 BMXP51813 675 aa15.02■□□□□ -0
TRAPPC4-203ENST00000447216 CAPZA1P52907 286 aa15.02■□□□□ -0
TRAPPC4-203ENST00000447216 RPS27AP62979 156 aaKnown RBP15.02■□□□□ -0
TRAPPC4-203ENST00000447216 SHEQ5VZ18 495 aa15.02■□□□□ -0
TRAPPC4-203ENST00000447216 FIP1L1Q6UN15 594 aaKnown RBP15.02■□□□□ -0
TRAPPC4-203ENST00000447216 PRSS57Q6UWY2 283 aa15.02■□□□□ -0
TRAPPC4-203ENST00000447216 Q96M66 194 aa15.02■□□□□ -0
TRAPPC4-203ENST00000447216 NICN1Q9BSH3 213 aa15.02■□□□□ -0
TRAPPC4-203ENST00000447216 ABRACLQ9P1F3 81 aa15.02■□□□□ -0
TRAPPC4-203ENST00000447216 ZNF222Q9UK12 451 aa15.02■□□□□ -0
TRAPPC4-203ENST00000447216 DSCAML1Q8TD84 2053 aa15.02□□□□□ -0.01
TRAPPC4-203ENST00000447216 MALRD1Q5VYJ5 2156 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 KIAA2026Q5HYC2 2103 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 A0A0A6YYD4 124 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 IGHV4-61A0A0C4DH41 118 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 SIRPB1O00241 398 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 TNFRSF13BO14836 293 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 ADAM20O43506 726 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 GABRR1P24046 479 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 SOX6P35712 828 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 IKZF1Q13422 519 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 IL13RA2Q14627 380 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 ZNF146Q15072 292 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 TAF9Q16594 264 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 TMEM155Q4W5P6 130 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 Q6P435 159 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 BIVMQ86UB2 503 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 MUC20Q8N307 709 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 FAM216BQ8N7L0 139 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 WFDC11Q8NEX6 87 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 CLDND2Q8NHS1 167 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 CYYR1Q96J86 154 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 GAFA1Q96PS6 74 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 LPAR5Q9H1C0 372 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 COMMD3Q9UBI1 195 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 FBLN5Q9UBX5 448 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 RAB22AQ9UL26 194 aa15.01□□□□□ -0.01
TRAPPC4-203ENST00000447216 NKX6-3A6NJ46 265 aa15□□□□□ -0.01
TRAPPC4-203ENST00000447216 FSTL3O95633 263 aa15□□□□□ -0.01
TRAPPC4-203ENST00000447216 OR2H2O95918 312 aa15□□□□□ -0.01
TRAPPC4-203ENST00000447216 ZNF44P15621 663 aa15□□□□□ -0.01
TRAPPC4-203ENST00000447216 SLC25A16P16260 332 aa15□□□□□ -0.01
TRAPPC4-203ENST00000447216 RANBP1P43487 201 aa15□□□□□ -0.01
TRAPPC4-203ENST00000447216 COL10A1Q03692 680 aa15□□□□□ -0.01
TRAPPC4-203ENST00000447216 KCNJ8Q15842 424 aa15□□□□□ -0.01
TRAPPC4-203ENST00000447216 NHLRC3Q5JS37 347 aa15□□□□□ -0.01
TRAPPC4-203ENST00000447216 SPIN3Q5JUX0 258 aa15□□□□□ -0.01
TRAPPC4-203ENST00000447216 ZNF788Q6ZQV5 615 aa15□□□□□ -0.01
TRAPPC4-203ENST00000447216 DCDC5Q6ZRR9 648 aa15□□□□□ -0.01
TRAPPC4-203ENST00000447216 FGFRL1Q8N441 504 aa15□□□□□ -0.01
TRAPPC4-203ENST00000447216 KCTD12Q96CX2 325 aaKnown RBP15□□□□□ -0.01
TRAPPC4-203ENST00000447216 SLC25A38Q96DW6 304 aa15□□□□□ -0.01
TRAPPC4-203ENST00000447216 MRPS24Q96EL2 167 aaKnown RBP15□□□□□ -0.01
TRAPPC4-203ENST00000447216 SLIRPQ9GZT3 109 aaKnown RBP15□□□□□ -0.01
TRAPPC4-203ENST00000447216 CTSZQ9UBR2 303 aa15□□□□□ -0.01
TRAPPC4-203ENST00000447216 SPATA2Q9UM82 520 aa15□□□□□ -0.01
TRAPPC4-203ENST00000447216 PCDHB10Q9UN67 800 aa15□□□□□ -0.01
TRAPPC4-203ENST00000447216 ETV7Q9Y603 341 aa15□□□□□ -0.01
TRAPPC4-203ENST00000447216 ITPR3Q14573 2671 aa15□□□□□ -0.01
TRAPPC4-203ENST00000447216 SH2D1BO14796 132 aa14.99□□□□□ -0.01
TRAPPC4-203ENST00000447216 DEGS1O15121 323 aa14.99□□□□□ -0.01
TRAPPC4-203ENST00000447216 OR7C1O76099 320 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms