RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 ZNF737O75373 536 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 CDRT1O95170 752 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 TFAP2AP05549 437 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 TMEM225BP0DP42 221 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 ZNF16P17020 682 aaPredicted RBP10.3□□□□□ -0.76
USP40-205ENST00000430158 GADD45AP24522 165 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 PRDX2P32119 198 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 ALDH3B2P48448 385 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 CEBPDP49716 269 aaPredicted RBP10.3□□□□□ -0.76
USP40-205ENST00000430158 DVL1P1P54792 670 aaPredicted RBP10.3□□□□□ -0.76
USP40-205ENST00000430158 Q6P435 159 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 NR2C2APQ86WQ0 139 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 NKAIN3Q8N8D7 197 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 OR8B3Q8NGG8 313 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 OR51T1Q8NGJ9 327 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 TNFAIP8L1Q8WVP5 186 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 OR8B2Q96RD0 313 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 UQCC2Q9BRT2 126 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 OR51E2Q9H255 320 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 TCF7L1Q9HCS4 588 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 MMP26Q9NRE1 261 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 TXNL4BQ9NX01 149 aaKnown RBP10.3□□□□□ -0.76
USP40-205ENST00000430158 C2CD3Q4AC94 2353 aa10.3□□□□□ -0.76
USP40-205ENST00000430158 A0A0G2JK05 382 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 TMEM82A0PJX8 343 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 DVL1O14640 695 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 TMPRSS2O15393 492 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 FOXH1O75593 365 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 ARL6IP5O75915 188 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 TGFAP01135 160 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 OCMP0CE72 109 aaPredicted RBP10.29□□□□□ -0.76
USP40-205ENST00000430158 CALCBP10092 127 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 CD36P16671 472 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 LMO1P25800 156 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 CALRP27797 417 aaKnown RBP10.29□□□□□ -0.76
USP40-205ENST00000430158 MTNR1BP49286 362 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 NPY4RP50391 375 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 FGF12P61328 243 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 LCN2P80188 198 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 QRFPP83859 136 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 C11orf91Q3C1V1 193 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 NHLRC3Q5JS37 347 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 C22orf42Q6IC83 251 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 NLRC3Q7RTR2 1065 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 ZNRF1Q8ND25 227 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 OR13F1Q8NGS4 319 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 TBC1D15Q8TC07 691 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 EMG1Q92979 244 aaKnown RBP10.29□□□□□ -0.76
USP40-205ENST00000430158 TMEM186Q96B77 213 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 CPNE2Q96FN4 548 aaPredicted RBP10.29□□□□□ -0.76
USP40-205ENST00000430158 SSBP3Q9BWW4 388 aaPredicted RBP10.29□□□□□ -0.76
USP40-205ENST00000430158 SHARPINQ9H0F6 387 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 LPAR2Q9HBW0 351 aa10.29□□□□□ -0.76
USP40-205ENST00000430158 TRAV20A0A0B4J274 112 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 A0A1W2PP11 408 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 K7N7A8 449 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 SLC22A1O15245 554 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 CYB5AP00167 134 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 PRKACAP17612 351 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 CFPP27918 469 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 DUSP1P28562 367 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 CAV3P56539 151 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 IL13RA1P78552 427 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 ESCO2Q56NI9 601 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 SPIN3Q5JUX0 258 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 C17orf107Q6ZR85 190 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 C1orf229Q6ZS94 237 aaPredicted RBP10.28□□□□□ -0.76
USP40-205ENST00000430158 SLC36A1Q7Z2H8 476 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 JAGN1Q8N5M9 183 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 LY6G5BQ8NDX9 201 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 OR10K1Q8NGX5 313 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 C8orf46Q8TAG6 207 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 MED30Q96HR3 178 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 GPER1Q99527 375 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 MRPS26Q9BYN8 205 aaKnown RBP10.28□□□□□ -0.76
USP40-205ENST00000430158 RNF167Q9H6Y7 350 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 HIF1ANQ9NWT6 349 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 TMEM160Q9NX00 188 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 ZNF581Q9P0T4 197 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 CLN8Q9UBY8 286 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 OPN4Q9UHM6 478 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 ING4Q9UNL4 249 aa10.28□□□□□ -0.76
USP40-205ENST00000430158 MRPS28Q9Y2Q9 187 aaKnown RBP10.28□□□□□ -0.76
USP40-205ENST00000430158 AK6Q9Y3D8 172 aaKnown RBP10.28□□□□□ -0.76
USP40-205ENST00000430158 KIR2DS1A0A191URI9 304 aa10.27□□□□□ -0.77
USP40-205ENST00000430158 SLC17A2O00624 439 aa10.27□□□□□ -0.77
USP40-205ENST00000430158 PSPNO60542 156 aa10.27□□□□□ -0.77
USP40-205ENST00000430158 HAND1O96004 215 aa10.27□□□□□ -0.77
USP40-205ENST00000430158 CHRM2P08172 466 aa10.27□□□□□ -0.77
USP40-205ENST00000430158 GABRA2P47869 451 aa10.27□□□□□ -0.77
USP40-205ENST00000430158 GNB2P62879 340 aa10.27□□□□□ -0.77
USP40-205ENST00000430158 COL10A1Q03692 680 aa10.27□□□□□ -0.77
USP40-205ENST00000430158 PAX8Q06710 450 aa10.27□□□□□ -0.77
USP40-205ENST00000430158 IKZF1Q13422 519 aa10.27□□□□□ -0.77
USP40-205ENST00000430158 GLT8D1Q68CQ7 371 aa10.27□□□□□ -0.77
USP40-205ENST00000430158 GLIPR1L1Q6UWM5 242 aa10.27□□□□□ -0.77
USP40-205ENST00000430158 Q71RC1 249 aaPredicted RBP10.27□□□□□ -0.77
USP40-205ENST00000430158 ZNF561Q8N587 486 aa10.27□□□□□ -0.77
USP40-205ENST00000430158 TMEM104Q8NE00 496 aa10.27□□□□□ -0.77
USP40-205ENST00000430158 RAB40AQ8WXH6 277 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms