RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 SHISA2Q6UWI4 295 aa17.93■□□□□ 0.46
TRAF4-204ENST00000422344 LDLRAD3Q86YD5 345 aa17.93■□□□□ 0.46
TRAF4-204ENST00000422344 CHIAQ9BZP6 476 aa17.93■□□□□ 0.46
TRAF4-204ENST00000422344 DPAGT1Q9H3H5 408 aa17.93■□□□□ 0.46
TRAF4-204ENST00000422344 ZNF696Q9H7X3 374 aa17.93■□□□□ 0.46
TRAF4-204ENST00000422344 HSPE1-MOB4S4R3N1 261 aa17.93■□□□□ 0.46
TRAF4-204ENST00000422344 MEIOCA2RUB1 952 aa17.92■□□□□ 0.46
TRAF4-204ENST00000422344 BTBD17A6NE02 478 aa17.92■□□□□ 0.46
TRAF4-204ENST00000422344 FAM181BA6NEQ2 426 aa17.92■□□□□ 0.46
TRAF4-204ENST00000422344 SULT1B1O43704 296 aa17.92■□□□□ 0.46
TRAF4-204ENST00000422344 SAA4P35542 130 aa17.92■□□□□ 0.46
TRAF4-204ENST00000422344 CAPGP40121 348 aa17.92■□□□□ 0.46
TRAF4-204ENST00000422344 NPBWR2P48146 333 aa17.92■□□□□ 0.46
TRAF4-204ENST00000422344 GTF2A1P52655 376 aaPredicted RBP17.92■□□□□ 0.46
TRAF4-204ENST00000422344 SNU13P55769 128 aaKnown RBP17.92■□□□□ 0.46
TRAF4-204ENST00000422344 ACSM1Q08AH1 577 aa17.92■□□□□ 0.46
TRAF4-204ENST00000422344 CCDC58Q4VC31 144 aa17.92■□□□□ 0.46
TRAF4-204ENST00000422344 RPL22L1Q6P5R6 122 aaKnown RBP17.92■□□□□ 0.46
TRAF4-204ENST00000422344 C8orf59Q8N0T1 100 aaPredicted RBP17.92■□□□□ 0.46
TRAF4-204ENST00000422344 PNKDQ8N490 385 aa17.92■□□□□ 0.46
TRAF4-204ENST00000422344 ZSCAN4Q8NAM6 433 aaPredicted RBP17.92■□□□□ 0.46
TRAF4-204ENST00000422344 OR5D18Q8NGL1 313 aa17.92■□□□□ 0.46
TRAF4-204ENST00000422344 SNX22Q96L94 193 aa17.92■□□□□ 0.46
TRAF4-204ENST00000422344 SPACA5Q96QH8 159 aa17.92■□□□□ 0.46
TRAF4-204ENST00000422344 DIMT1Q9UNQ2 313 aaKnown RBP17.92■□□□□ 0.46
TRAF4-204ENST00000422344 PCDHGB5Q9Y5G0 923 aa17.92■□□□□ 0.46
TRAF4-204ENST00000422344 CASQ2O14958 399 aaPredicted RBP17.91■□□□□ 0.46
TRAF4-204ENST00000422344 ZNF737O75373 536 aa17.91■□□□□ 0.46
TRAF4-204ENST00000422344 IGHV4-59P01825 116 aa17.91■□□□□ 0.46
TRAF4-204ENST00000422344 GABRR1P24046 479 aa17.91■□□□□ 0.46
TRAF4-204ENST00000422344 IER3P46695 156 aa17.91■□□□□ 0.46
TRAF4-204ENST00000422344 SPIN3Q5JUX0 258 aa17.91■□□□□ 0.46
TRAF4-204ENST00000422344 OR2G6Q5TZ20 316 aa17.91■□□□□ 0.46
TRAF4-204ENST00000422344 OR8H2Q8N162 312 aa17.91■□□□□ 0.46
TRAF4-204ENST00000422344 PARP16Q8N5Y8 322 aa17.91■□□□□ 0.46
TRAF4-204ENST00000422344 CPNE2Q96FN4 548 aaPredicted RBP17.91■□□□□ 0.46
TRAF4-204ENST00000422344 TMEM80Q96HE8 168 aa17.91■□□□□ 0.46
TRAF4-204ENST00000422344 HEXA-AS1Q9H8Q6 139 aa17.91■□□□□ 0.46
TRAF4-204ENST00000422344 IL36RNQ9UBH0 155 aa17.91■□□□□ 0.46
TRAF4-204ENST00000422344 MAGEB3O15480 346 aa17.9■□□□□ 0.46
TRAF4-204ENST00000422344 CD2P06729 351 aa17.9■□□□□ 0.46
TRAF4-204ENST00000422344 CALCBP10092 127 aa17.9■□□□□ 0.46
TRAF4-204ENST00000422344 CCL3L1P16619 93 aa17.9■□□□□ 0.46
TRAF4-204ENST00000422344 ERVFRD-1P60508 538 aa17.9■□□□□ 0.46
TRAF4-204ENST00000422344 EDDM3AQ14507 147 aa17.9■□□□□ 0.46
TRAF4-204ENST00000422344 ZNF273Q14593 569 aa17.9■□□□□ 0.46
TRAF4-204ENST00000422344 CDK5R1Q15078 307 aa17.9■□□□□ 0.46
TRAF4-204ENST00000422344 PPP1R35Q8TAP8 253 aa17.9■□□□□ 0.46
TRAF4-204ENST00000422344 GPR148Q8TDV2 347 aa17.9■□□□□ 0.46
TRAF4-204ENST00000422344 DYRK2Q92630 601 aa17.9■□□□□ 0.46
TRAF4-204ENST00000422344 DCLRE1BQ9H816 532 aa17.9■□□□□ 0.46
TRAF4-204ENST00000422344 SEBOXQ9HB31 216 aaPredicted RBP17.9■□□□□ 0.46
TRAF4-204ENST00000422344 HMG20AQ9NP66 347 aa17.9■□□□□ 0.46
TRAF4-204ENST00000422344 TMEM82A0PJX8 343 aa17.89■□□□□ 0.45
TRAF4-204ENST00000422344 ALX3O95076 343 aa17.89■□□□□ 0.45
TRAF4-204ENST00000422344 TMEM225BP0DP42 221 aa17.89■□□□□ 0.45
TRAF4-204ENST00000422344 RAB3AP20336 220 aa17.89■□□□□ 0.45
TRAF4-204ENST00000422344 OMGP23515 440 aa17.89■□□□□ 0.45
TRAF4-204ENST00000422344 DUSP1P28562 367 aa17.89■□□□□ 0.45
TRAF4-204ENST00000422344 SOX2P48431 317 aa17.89■□□□□ 0.45
TRAF4-204ENST00000422344 ZNF146Q15072 292 aa17.89■□□□□ 0.45
TRAF4-204ENST00000422344 GRK1Q15835 563 aa17.89■□□□□ 0.45
TRAF4-204ENST00000422344 MIDNQ504T8 468 aa17.89■□□□□ 0.45
TRAF4-204ENST00000422344 SAXO1Q8IYX7 474 aa17.89■□□□□ 0.45
TRAF4-204ENST00000422344 TAF15Q92804 592 aaKnown RBP eCLIP17.89■□□□□ 0.45
TRAF4-204ENST00000422344 RHOFQ9HBH0 211 aa17.89■□□□□ 0.45
TRAF4-204ENST00000422344 EXOSC4Q9NPD3 245 aaKnown RBP17.89■□□□□ 0.45
TRAF4-204ENST00000422344 BABAM2Q9NXR7 383 aa17.89■□□□□ 0.45
TRAF4-204ENST00000422344 ZNRD1Q9P1U0 126 aa17.89■□□□□ 0.45
TRAF4-204ENST00000422344 GSTK1Q9Y2Q3 226 aa17.89■□□□□ 0.45
TRAF4-204ENST00000422344 hADV38S2A0JD32 116 aa17.88■□□□□ 0.45
TRAF4-204ENST00000422344 EFCAB10A6NFE3 127 aa17.88■□□□□ 0.45
TRAF4-204ENST00000422344 SH2D1BO14796 132 aa17.88■□□□□ 0.45
TRAF4-204ENST00000422344 KDM4BO94953 1096 aa17.88■□□□□ 0.45
TRAF4-204ENST00000422344 COX7A1P24310 79 aa17.88■□□□□ 0.45
TRAF4-204ENST00000422344 RPL15P61313 204 aaKnown RBP17.88■□□□□ 0.45
TRAF4-204ENST00000422344 MEF2CQ06413 473 aaPredicted RBP17.88■□□□□ 0.45
TRAF4-204ENST00000422344 KISS1Q15726 138 aa17.88■□□□□ 0.45
TRAF4-204ENST00000422344 XAF1Q6GPH4 301 aa17.88■□□□□ 0.45
TRAF4-204ENST00000422344 OR4F5Q8NH21 305 aa17.88■□□□□ 0.45
TRAF4-204ENST00000422344 GPER1Q99527 375 aa17.88■□□□□ 0.45
TRAF4-204ENST00000422344 CHST6Q9GZX3 395 aa17.88■□□□□ 0.45
TRAF4-204ENST00000422344 IGKV1-12A0A0C4DH73 117 aa17.87■□□□□ 0.45
TRAF4-204ENST00000422344 POM121CA8CG34 1229 aa17.87■□□□□ 0.45
TRAF4-204ENST00000422344 SIRPB1O00241 398 aa17.87■□□□□ 0.45
TRAF4-204ENST00000422344 GPR137BO60478 399 aa17.87■□□□□ 0.45
TRAF4-204ENST00000422344 IGKV1D-12P01611 117 aa17.87■□□□□ 0.45
TRAF4-204ENST00000422344 GNAO1P09471 354 aa17.87■□□□□ 0.45
TRAF4-204ENST00000422344 RAG2P55895 527 aa17.87■□□□□ 0.45
TRAF4-204ENST00000422344 ST3GAL4Q11206 333 aa17.87■□□□□ 0.45
TRAF4-204ENST00000422344 HCP5Q6MZN7 132 aa17.87■□□□□ 0.45
TRAF4-204ENST00000422344 ZNF782Q6ZMW2 699 aaPredicted RBP17.87■□□□□ 0.45
TRAF4-204ENST00000422344 GDPGP1Q6ZNW5 385 aa17.87■□□□□ 0.45
TRAF4-204ENST00000422344 C17orf107Q6ZR85 190 aa17.87■□□□□ 0.45
TRAF4-204ENST00000422344 OR52N1Q8NH53 320 aa17.87■□□□□ 0.45
TRAF4-204ENST00000422344 RGP1Q92546 391 aaPredicted RBP17.87■□□□□ 0.45
TRAF4-204ENST00000422344 GGHQ92820 318 aa17.87■□□□□ 0.45
TRAF4-204ENST00000422344 BEX1Q9HBH7 125 aa17.87■□□□□ 0.45
TRAF4-204ENST00000422344 CLEC2DQ9UHP7 191 aa17.87■□□□□ 0.45
TRAF4-204ENST00000422344 MEX3AA1L020 520 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms