RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 C1orf122Q6ZSJ8 110 aa10.55□□□□□ -0.72
LINC00339-202ENST00000416769 COMMD2Q86X83 199 aa10.55□□□□□ -0.72
LINC00339-202ENST00000416769 LY6G5BQ8NDX9 201 aa10.55□□□□□ -0.72
LINC00339-202ENST00000416769 LRRC29Q8WV35 223 aa10.55□□□□□ -0.72
LINC00339-202ENST00000416769 CNTD2Q9H8S5 307 aa10.55□□□□□ -0.72
LINC00339-202ENST00000416769 TRBV5-5A0A0J9YX44 114 aa10.54□□□□□ -0.72
LINC00339-202ENST00000416769 TSPAN9O75954 239 aa10.54□□□□□ -0.72
LINC00339-202ENST00000416769 SERPINA3P01011 423 aa10.54□□□□□ -0.72
LINC00339-202ENST00000416769 GABRA5P31644 462 aa10.54□□□□□ -0.72
LINC00339-202ENST00000416769 RPL15P61313 204 aaKnown RBP10.54□□□□□ -0.72
LINC00339-202ENST00000416769 FAM189A2Q15884 450 aa10.54□□□□□ -0.72
LINC00339-202ENST00000416769 LY6EQ16553 131 aa10.54□□□□□ -0.72
LINC00339-202ENST00000416769 Q499Y3 187 aa10.54□□□□□ -0.72
LINC00339-202ENST00000416769 FBLN7Q53RD9 439 aa10.54□□□□□ -0.72
LINC00339-202ENST00000416769 TEX36Q5VZQ5 186 aa10.54□□□□□ -0.72
LINC00339-202ENST00000416769 GDPGP1Q6ZNW5 385 aa10.54□□□□□ -0.72
LINC00339-202ENST00000416769 OR10AC1Q8NH08 325 aa10.54□□□□□ -0.72
LINC00339-202ENST00000416769 RGP1Q92546 391 aaPredicted RBP10.54□□□□□ -0.72
LINC00339-202ENST00000416769 THRSPQ92748 146 aa10.54□□□□□ -0.72
LINC00339-202ENST00000416769 TNFRSF14Q92956 283 aa10.54□□□□□ -0.72
LINC00339-202ENST00000416769 ELL3Q9HB65 397 aaPredicted RBP10.54□□□□□ -0.72
LINC00339-202ENST00000416769 SNTG1Q9NSN8 517 aa10.54□□□□□ -0.72
LINC00339-202ENST00000416769 NDUFB11Q9NX14 153 aa10.54□□□□□ -0.72
LINC00339-202ENST00000416769 FAM96BQ9Y3D0 163 aa10.54□□□□□ -0.72
LINC00339-202ENST00000416769 NPFFO15130 113 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 SC5DO75845 299 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 GATBO75879 557 aaKnown RBP10.53□□□□□ -0.72
LINC00339-202ENST00000416769 CST4P01036 141 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 GALP22466 123 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 ACKR3P25106 362 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 SAA4P35542 130 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 RPS25P62851 125 aaKnown RBP10.53□□□□□ -0.72
LINC00339-202ENST00000416769 ACSM3Q53FZ2 586 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 KPRPQ5T749 579 aaPredicted RBP10.53□□□□□ -0.72
LINC00339-202ENST00000416769 FTMTQ8N4E7 242 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 OR51A4Q8NGJ6 313 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 OR13F1Q8NGS4 319 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 OR13C3Q8NGS6 347 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 PHYHIPQ92561 330 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 FGGYQ96C11 551 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 YIPF6Q96EC8 236 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 AJUBAQ96IF1 538 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 TMED9Q9BVK6 235 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 FGF23Q9GZV9 251 aaPredicted RBP10.53□□□□□ -0.72
LINC00339-202ENST00000416769 SLC22A4Q9H015 551 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 WDR13Q9H1Z4 485 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 DPAGT1Q9H3H5 408 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 MRPL15Q9P015 296 aaKnown RBP10.53□□□□□ -0.72
LINC00339-202ENST00000416769 KAAG1Q9UBP8 84 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 ENPP5Q9UJA9 477 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 DHDHQ9UQ10 334 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 PIGLQ9Y2B2 252 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 KPTNQ9Y664 436 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 RYR3Q15413 4870 aa10.53□□□□□ -0.72
LINC00339-202ENST00000416769 DNAH3Q8TD57 4116 aa10.52□□□□□ -0.72
LINC00339-202ENST00000416769 TRDV1A0A1B0GX56 115 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 ANKRD30BLA7E2S9 258 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 H3BSH0 61 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 GMDSO60547 372 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 ALX3O95076 343 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 CD2P06729 351 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 FBP1P09467 338 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 OCM2P0CE71 109 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 CD36P16671 472 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 MAPK3P27361 379 aaPredicted RBP10.52□□□□□ -0.73
LINC00339-202ENST00000416769 KCNJ8Q15842 424 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 OXLD1Q5BKU9 147 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 TMEM42Q69YG0 159 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 HCP5Q6MZN7 132 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 CD200R1LQ6Q8B3 271 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 WDR82Q6UXN9 313 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 TMEM91Q6ZNR0 172 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 SERPINA12Q8IW75 414 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 PARP16Q8N5Y8 322 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 TSEN15Q8WW01 171 aaKnown RBP10.52□□□□□ -0.73
LINC00339-202ENST00000416769 PP6455Q8WZ26 134 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 PIGCQ92535 297 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 TMEM203Q969S6 136 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 MPC1Q9Y5U8 109 aa10.52□□□□□ -0.73
LINC00339-202ENST00000416769 TRBV5-7A0A0A0MS05 114 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 MEIOCA2RUB1 952 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 ANKRD61A6NGH8 418 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 H3BUX3 64 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 PIN1P1O15428 100 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 CHST1O43916 411 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 GPX5O75715 221 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 OPN1MWP04001 364 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 OPN1MW2P0DN77 364 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 OPN1MW3P0DN78 364 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 FAHP16930 419 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 ZNF20P17024 532 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 TGFBR2P37173 567 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 SOX2P48431 317 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 EFNB2P52799 333 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 FABP5Q01469 135 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 HERPUD1Q15011 391 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 DGUOKQ16854 277 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 CLVS2Q5SYC1 327 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 GPR141Q7Z602 305 aa10.51□□□□□ -0.73
LINC00339-202ENST00000416769 CEACAM19Q7Z692 300 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms