RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 LINC01006Q8NI28 216 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 WFDC12Q8WWY7 111 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 OPALINQ96PE5 141 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 SPACA5Q96QH8 159 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 NEK6Q9HC98 313 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 MRPS18AQ9NVS2 196 aaKnown RBP10.84□□□□□ -0.67
SDF4-203ENST00000403997 ERVK13-1Q9NX77 482 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 IL36RNQ9UBH0 155 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 GLS2Q9UI32 602 aa10.84□□□□□ -0.67
SDF4-203ENST00000403997 C17orf98A8MV24 154 aa10.83□□□□□ -0.68
SDF4-203ENST00000403997 E9PI62 339 aa10.83□□□□□ -0.68
SDF4-203ENST00000403997 ZNF728P0DKX0 622 aa10.83□□□□□ -0.68
SDF4-203ENST00000403997 GABRR1P24046 479 aa10.83□□□□□ -0.68
SDF4-203ENST00000403997 PAX6P26367 422 aa10.83□□□□□ -0.68
SDF4-203ENST00000403997 PEX2P28328 305 aa10.83□□□□□ -0.68
SDF4-203ENST00000403997 BMXP51813 675 aa10.83□□□□□ -0.68
SDF4-203ENST00000403997 BRICD5Q6PL45 260 aa10.83□□□□□ -0.68
SDF4-203ENST00000403997 Q6ZSV7 163 aa10.83□□□□□ -0.68
SDF4-203ENST00000403997 OR13C9Q8NGT0 318 aa10.83□□□□□ -0.68
SDF4-203ENST00000403997 AJUBAQ96IF1 538 aa10.83□□□□□ -0.68
SDF4-203ENST00000403997 ZNF649Q9BS31 505 aa10.83□□□□□ -0.68
SDF4-203ENST00000403997 CHST6Q9GZX3 395 aa10.83□□□□□ -0.68
SDF4-203ENST00000403997 COMMD4Q9H0A8 199 aa10.83□□□□□ -0.68
SDF4-203ENST00000403997 MEGF9Q9H1U4 602 aa10.83□□□□□ -0.68
SDF4-203ENST00000403997 PPA2Q9H2U2 334 aa10.83□□□□□ -0.68
SDF4-203ENST00000403997 ZCCHC4Q9H5U6 513 aa10.83□□□□□ -0.68
SDF4-203ENST00000403997 SEBOXQ9HB31 216 aaPredicted RBP10.83□□□□□ -0.68
SDF4-203ENST00000403997 SMPD3Q9NY59 655 aaPredicted RBP10.83□□□□□ -0.68
SDF4-203ENST00000403997 hADV38S2A0JD32 116 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 TMEM212A6NML5 194 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 SH2D1BO14796 132 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 ZFPL1O95159 310 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 MT-ND2P03891 347 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 RPSAP08865 295 aaKnown RBP10.82□□□□□ -0.68
SDF4-203ENST00000403997 CCDC159P0C7I6 412 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 DLX6P56179 175 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 MEF2CQ06413 473 aaPredicted RBP10.82□□□□□ -0.68
SDF4-203ENST00000403997 MRPL28Q13084 256 aaKnown RBP10.82□□□□□ -0.68
SDF4-203ENST00000403997 ZNF146Q15072 292 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 GRK1Q15835 563 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 LY6EQ16553 131 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 SMN1Q16637 294 aaKnown RBP10.82□□□□□ -0.68
SDF4-203ENST00000403997 ZSCAN26Q16670 478 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 LRRC36Q1X8D7 754 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 LRRC75BQ2VPJ9 315 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 LPCAT4Q643R3 524 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 RNF144BQ7Z419 303 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 SERPINA12Q8IW75 414 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 OR4S1Q8NGB4 309 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 OR52N4Q8NGI2 321 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 OR5D18Q8NGL1 313 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 OR5D14Q8NGL3 314 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 OR13D1Q8NGV5 346 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 APH1BQ8WW43 257 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 RDH12Q96NR8 316 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 PDCD1LG2Q9BQ51 273 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 C16orf95Q9H693 158 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 HMG20AQ9NP66 347 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 GSTK1Q9Y2Q3 226 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 MGAM2Q2M2H8 2515 aa10.82□□□□□ -0.68
SDF4-203ENST00000403997 IGKV1-12A0A0C4DH73 117 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 MGST3O14880 152 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 PSPNO60542 156 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 WBP4O75554 376 aaKnown RBP10.81□□□□□ -0.68
SDF4-203ENST00000403997 TSPAN9O75954 239 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 CLPXO76031 633 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 IGKV1D-12P01611 117 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 ARG1P05089 322 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 HCKP08631 526 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 IGHV1-8P0DP01 117 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 TMEM225BP0DP42 221 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 PROK1P58294 105 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 SCN1BQ07699 218 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 DYNC1I2Q13409 638 aaKnown RBP10.81□□□□□ -0.68
SDF4-203ENST00000403997 SPIN3Q5JUX0 258 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 TREML4Q6UXN2 200 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 LHFPL4Q7Z7J7 247 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 TPRX1Q8N7U7 411 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 PPP1R35Q8TAP8 253 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 TSEN15Q8WW01 171 aaKnown RBP10.81□□□□□ -0.68
SDF4-203ENST00000403997 CYGBQ8WWM9 190 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 ZNF714Q96N38 554 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 CITED1Q99966 193 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 FGF20Q9NP95 211 aaPredicted RBP10.81□□□□□ -0.68
SDF4-203ENST00000403997 DHDHQ9UQ10 334 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 PCDHGB5Q9Y5G0 923 aa10.81□□□□□ -0.68
SDF4-203ENST00000403997 SIRPB1O00241 398 aa10.8□□□□□ -0.68
SDF4-203ENST00000403997 KDM4BO94953 1096 aa10.8□□□□□ -0.68
SDF4-203ENST00000403997 ALX3O95076 343 aa10.8□□□□□ -0.68
SDF4-203ENST00000403997 CLIC3O95833 236 aa10.8□□□□□ -0.68
SDF4-203ENST00000403997 RBP4P02753 201 aa10.8□□□□□ -0.68
SDF4-203ENST00000403997 LIMS3P0CW19 117 aa10.8□□□□□ -0.68
SDF4-203ENST00000403997 LIMS4P0CW20 117 aa10.8□□□□□ -0.68
SDF4-203ENST00000403997 GTF2A1P52655 376 aaPredicted RBP10.8□□□□□ -0.68
SDF4-203ENST00000403997 KRTAP10-3P60369 221 aa10.8□□□□□ -0.68
SDF4-203ENST00000403997 KISS1Q15726 138 aa10.8□□□□□ -0.68
SDF4-203ENST00000403997 AANATQ16613 207 aa10.8□□□□□ -0.68
SDF4-203ENST00000403997 SLC35E4Q6ICL7 350 aa10.8□□□□□ -0.68
SDF4-203ENST00000403997 TMPRSS11AQ6ZMR5 421 aa10.8□□□□□ -0.68
SDF4-203ENST00000403997 TCF23Q7RTU1 214 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms