RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 STUMQ69YW2 141 aa19.74■□□□□ 0.75
TSPAN4-203ENST00000397397 OR51T1Q8NGJ9 327 aa19.74■□□□□ 0.75
TSPAN4-203ENST00000397397 LGALS14Q8TCE9 139 aa19.74■□□□□ 0.75
TSPAN4-203ENST00000397397 MRPS24Q96EL2 167 aaKnown RBP19.74■□□□□ 0.75
TSPAN4-203ENST00000397397 SELENOIQ9C0D9 397 aa19.74■□□□□ 0.75
TSPAN4-203ENST00000397397 ABRACLQ9P1F3 81 aa19.74■□□□□ 0.75
TSPAN4-203ENST00000397397 ST3GAL6Q9Y274 331 aa19.74■□□□□ 0.75
TSPAN4-203ENST00000397397 TFF1P04155 84 aa19.73■□□□□ 0.75
TSPAN4-203ENST00000397397 SLC25A16P16260 332 aa19.73■□□□□ 0.75
TSPAN4-203ENST00000397397 ZNF182P17025 639 aaPredicted RBP19.73■□□□□ 0.75
TSPAN4-203ENST00000397397 CEBPDP49716 269 aaPredicted RBP19.73■□□□□ 0.75
TSPAN4-203ENST00000397397 RBM11P57052 281 aaKnown RBP19.73■□□□□ 0.75
TSPAN4-203ENST00000397397 SPIN3Q5JUX0 258 aa19.73■□□□□ 0.75
TSPAN4-203ENST00000397397 ANGPTL6Q8NI99 470 aa19.73■□□□□ 0.75
TSPAN4-203ENST00000397397 Q96MF0 132 aa19.73■□□□□ 0.75
TSPAN4-203ENST00000397397 GAL3ST1Q99999 423 aa19.73■□□□□ 0.75
TSPAN4-203ENST00000397397 DCUN1D5Q9BTE7 237 aa19.73■□□□□ 0.75
TSPAN4-203ENST00000397397 MRI1Q9BV20 369 aa19.73■□□□□ 0.75
TSPAN4-203ENST00000397397 TMEM59Q9BXS4 323 aa19.73■□□□□ 0.75
TSPAN4-203ENST00000397397 GLS2Q9UI32 602 aa19.73■□□□□ 0.75
TSPAN4-203ENST00000397397 MYO9AB2RTY4 2548 aa19.73■□□□□ 0.75
TSPAN4-203ENST00000397397 IGKV1D-17A0A075B6S4 117 aa19.72■□□□□ 0.75
TSPAN4-203ENST00000397397 LDLRAD4O15165 306 aa19.72■□□□□ 0.75
TSPAN4-203ENST00000397397 PRDX2P32119 198 aa19.72■□□□□ 0.75
TSPAN4-203ENST00000397397 PLA2G7Q13093 441 aa19.72■□□□□ 0.75
TSPAN4-203ENST00000397397 IL13RA2Q14627 380 aa19.72■□□□□ 0.75
TSPAN4-203ENST00000397397 ZNF146Q15072 292 aa19.72■□□□□ 0.75
TSPAN4-203ENST00000397397 SPICQ8N5J4 248 aa19.72■□□□□ 0.75
TSPAN4-203ENST00000397397 KCTD12Q96CX2 325 aaKnown RBP19.72■□□□□ 0.75
TSPAN4-203ENST00000397397 CCL13Q99616 98 aa19.72■□□□□ 0.75
TSPAN4-203ENST00000397397 CCDC59Q9P031 241 aaKnown RBP19.72■□□□□ 0.75
TSPAN4-203ENST00000397397 FBLN5Q9UBX5 448 aa19.72■□□□□ 0.75
TSPAN4-203ENST00000397397 RAB22AQ9UL26 194 aa19.72■□□□□ 0.75
TSPAN4-203ENST00000397397 NDUFA2O43678 99 aa19.71■□□□□ 0.75
TSPAN4-203ENST00000397397 HAND1O96004 215 aa19.71■□□□□ 0.75
TSPAN4-203ENST00000397397 SCN1BQ07699 218 aa19.71■□□□□ 0.75
TSPAN4-203ENST00000397397 PDCD1Q15116 288 aa19.71■□□□□ 0.75
TSPAN4-203ENST00000397397 NHLRC3Q5JS37 347 aa19.71■□□□□ 0.75
TSPAN4-203ENST00000397397 DCDC5Q6ZRR9 648 aa19.71■□□□□ 0.75
TSPAN4-203ENST00000397397 OR5H6Q8NGV6 325 aa19.71■□□□□ 0.75
TSPAN4-203ENST00000397397 AP3S1Q92572 193 aa19.71■□□□□ 0.75
TSPAN4-203ENST00000397397 ZNF222Q9UK12 451 aa19.71■□□□□ 0.75
TSPAN4-203ENST00000397397 PCDHB10Q9UN67 800 aa19.71■□□□□ 0.75
TSPAN4-203ENST00000397397 NKX6-3A6NJ46 265 aa19.7■□□□□ 0.74
TSPAN4-203ENST00000397397 CEACAM18A8MTB9 384 aa19.7■□□□□ 0.74
TSPAN4-203ENST00000397397 SH2D1BO14796 132 aa19.7■□□□□ 0.74
TSPAN4-203ENST00000397397 TNFRSF13BO14836 293 aaPredicted RBP19.7■□□□□ 0.74
TSPAN4-203ENST00000397397 GEMIN2O14893 280 aaKnown RBP19.7■□□□□ 0.74
TSPAN4-203ENST00000397397 ADAM20O43506 726 aa19.7■□□□□ 0.74
TSPAN4-203ENST00000397397 SCAND1P57086 179 aa19.7■□□□□ 0.74
TSPAN4-203ENST00000397397 RPS27AP62979 156 aaKnown RBP19.7■□□□□ 0.74
TSPAN4-203ENST00000397397 IKZF1Q13422 519 aa19.7■□□□□ 0.74
TSPAN4-203ENST00000397397 METAP1DQ6UB28 335 aaPredicted RBP19.7■□□□□ 0.74
TSPAN4-203ENST00000397397 LYPD2Q6UXB3 125 aa19.7■□□□□ 0.74
TSPAN4-203ENST00000397397 CD177Q8N6Q3 437 aa19.7■□□□□ 0.74
TSPAN4-203ENST00000397397 Q96M66 194 aa19.7■□□□□ 0.74
TSPAN4-203ENST00000397397 URM1Q9BTM9 101 aaKnown RBP19.7■□□□□ 0.74
TSPAN4-203ENST00000397397 SPATA2Q9UM82 520 aa19.7■□□□□ 0.74
TSPAN4-203ENST00000397397 ETV7Q9Y603 341 aa19.7■□□□□ 0.74
TSPAN4-203ENST00000397397 AMY2BP19961 511 aa19.69■□□□□ 0.74
TSPAN4-203ENST00000397397 RAB6AP20340 208 aa19.69■□□□□ 0.74
TSPAN4-203ENST00000397397 GABRR1P24046 479 aa19.69■□□□□ 0.74
TSPAN4-203ENST00000397397 EFNB2P52799 333 aa19.69■□□□□ 0.74
TSPAN4-203ENST00000397397 TAF9Q16594 264 aa19.69■□□□□ 0.74
TSPAN4-203ENST00000397397 ATPAF1Q5TC12 328 aaPredicted RBP19.69■□□□□ 0.74
TSPAN4-203ENST00000397397 LINC00596Q86U02 117 aa19.69■□□□□ 0.74
TSPAN4-203ENST00000397397 WFDC11Q8NEX6 87 aa19.69■□□□□ 0.74
TSPAN4-203ENST00000397397 CLDND2Q8NHS1 167 aa19.69■□□□□ 0.74
TSPAN4-203ENST00000397397 ACOT12Q8WYK0 555 aa19.69■□□□□ 0.74
TSPAN4-203ENST00000397397 GAFA1Q96PS6 74 aa19.69■□□□□ 0.74
TSPAN4-203ENST00000397397 DNTTIP1Q9H147 329 aa19.69■□□□□ 0.74
TSPAN4-203ENST00000397397 ZNF665Q9H7R5 613 aa19.69■□□□□ 0.74
TSPAN4-203ENST00000397397 MIOXQ9UGB7 285 aa19.69■□□□□ 0.74
TSPAN4-203ENST00000397397 METRNQ9UJH8 293 aa19.69■□□□□ 0.74
TSPAN4-203ENST00000397397 PRRC2AP48634 2157 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 IGHV4-61A0A0C4DH41 118 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 SIRPB1O00241 398 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 DEGS1O15121 323 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 TMPRSS2O15393 492 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 CHRM2P08172 466 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 ZNF44P15621 663 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 RPS2P15880 293 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 COL10A1Q03692 680 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 Q6P435 159 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 MZT2AQ6P582 158 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 ZNF788Q6ZQV5 615 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 SLC36A1Q7Z2H8 476 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 PTX4Q96A99 478 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 SDSLQ96GA7 329 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 NICN1Q9BSH3 213 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 TM2D1Q9BX74 207 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 LPAR5Q9H1C0 372 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 SEBOXQ9HB31 216 aaPredicted RBP19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 COMMD3Q9UBI1 195 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 CCDC168Q8NDH2 2452 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 A0A1B0GW55 424 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 OR7C1O76099 320 aaPredicted RBP19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 OR2H2O95918 312 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 DUX4L2P0CJ85 424 aa19.68■□□□□ 0.74
TSPAN4-203ENST00000397397 DUX4L3P0CJ86 424 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms