RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 ZNF671Q8TAW3 534 aa12.1□□□□□ -0.47
SEC13-208ENST00000397109 GPR148Q8TDV2 347 aa12.1□□□□□ -0.47
SEC13-208ENST00000397109 DIRAS2Q96HU8 199 aa12.1□□□□□ -0.47
SEC13-208ENST00000397109 C19orf24Q9BVV8 132 aa12.1□□□□□ -0.47
SEC13-208ENST00000397109 V9GYS6 101 aa12.1□□□□□ -0.47
SEC13-208ENST00000397109 IGHV3OR15-7A0A075B7D8 119 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 ZNF732B4DXR9 585 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 TMPRSS2O15393 492 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 VENTXO95231 258 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 ECDO95905 644 aaPredicted RBP12.09□□□□□ -0.47
SEC13-208ENST00000397109 OCM2P0CE71 109 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 OCMP0CE72 109 aaPredicted RBP12.09□□□□□ -0.47
SEC13-208ENST00000397109 SCAND1P57086 179 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 HILS1P60008 231 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 SRSF2Q01130 221 aaKnown RBP12.09□□□□□ -0.47
SEC13-208ENST00000397109 INSL4Q14641 139 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 TRIM16LQ309B1 348 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 CEP78Q5JTW2 689 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 PLCXD3Q63HM9 321 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 SFXN4Q6P4A7 337 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 LAX1Q8IWV1 398 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 CENPSQ8N2Z9 138 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 PNLDC1Q8NA58 520 aaKnown RBP12.09□□□□□ -0.47
SEC13-208ENST00000397109 OR14K1Q8NGZ2 314 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 UPRTQ96BW1 309 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 PDCD1LG2Q9BQ51 273 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 SOSTQ9BQB4 213 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 FGF23Q9GZV9 251 aaPredicted RBP12.09□□□□□ -0.47
SEC13-208ENST00000397109 DNTTIP1Q9H147 329 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 MIXL1Q9H2W2 232 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 OR51I2Q9H344 312 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 DNAJB11Q9UBS4 358 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 V9GYH0 126 aa12.09□□□□□ -0.47
SEC13-208ENST00000397109 A0A1B0GVI7 797 aa12.08□□□□□ -0.47
SEC13-208ENST00000397109 LOC107986453A0A1B0GWG9 222 aa12.08□□□□□ -0.47
SEC13-208ENST00000397109 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.08□□□□□ -0.47
SEC13-208ENST00000397109 P2RY10O00398 339 aa12.08□□□□□ -0.47
SEC13-208ENST00000397109 DVL1O14640 695 aa12.08□□□□□ -0.47
SEC13-208ENST00000397109 GPR37O15354 613 aa12.08□□□□□ -0.47
SEC13-208ENST00000397109 PTTG1O95997 202 aa12.08□□□□□ -0.47
SEC13-208ENST00000397109 IFITM3Q01628 133 aa12.08□□□□□ -0.47
SEC13-208ENST00000397109 KLF17Q5JT82 389 aaPredicted RBP12.08□□□□□ -0.47
SEC13-208ENST00000397109 ATPAF1Q5TC12 328 aaPredicted RBP12.08□□□□□ -0.47
SEC13-208ENST00000397109 TMEM42Q69YG0 159 aa12.08□□□□□ -0.47
SEC13-208ENST00000397109 ZNF676Q8N7Q3 588 aa12.08□□□□□ -0.47
SEC13-208ENST00000397109 DERL3Q96Q80 235 aa12.08□□□□□ -0.47
SEC13-208ENST00000397109 SLC6A7Q99884 636 aa12.08□□□□□ -0.47
SEC13-208ENST00000397109 PPIL3Q9H2H8 161 aaKnown RBP12.08□□□□□ -0.47
SEC13-208ENST00000397109 COMMD3Q9UBI1 195 aa12.08□□□□□ -0.47
SEC13-208ENST00000397109 DAPK2Q9UIK4 370 aa12.08□□□□□ -0.47
SEC13-208ENST00000397109 A0A0G2JK05 382 aa12.08□□□□□ -0.48
SEC13-208ENST00000397109 C22orf46C9J442 243 aa12.08□□□□□ -0.48
SEC13-208ENST00000397109 TRIM77I1YAP6 450 aa12.08□□□□□ -0.48
SEC13-208ENST00000397109 AKR7A2O43488 359 aa12.08□□□□□ -0.48
SEC13-208ENST00000397109 TALDO1P37837 337 aa12.08□□□□□ -0.48
SEC13-208ENST00000397109 RANBP1P43487 201 aa12.08□□□□□ -0.48
SEC13-208ENST00000397109 IDNKQ5T6J7 187 aa12.08□□□□□ -0.48
SEC13-208ENST00000397109 STUMQ69YW2 141 aa12.08□□□□□ -0.48
SEC13-208ENST00000397109 FAM131AQ6UXB0 335 aa12.08□□□□□ -0.48
SEC13-208ENST00000397109 RBMS3Q6XE24 437 aaKnown RBP12.08□□□□□ -0.48
SEC13-208ENST00000397109 ZNF573Q86YE8 665 aa12.08□□□□□ -0.48
SEC13-208ENST00000397109 RGP1Q92546 391 aaPredicted RBP12.08□□□□□ -0.48
SEC13-208ENST00000397109 C10orf35Q96D05 121 aa12.08□□□□□ -0.48
SEC13-208ENST00000397109 MED30Q96HR3 178 aa12.08□□□□□ -0.48
SEC13-208ENST00000397109 DMRTB1Q96MA1 342 aa12.08□□□□□ -0.48
SEC13-208ENST00000397109 OR14A2Q96R54 314 aa12.08□□□□□ -0.48
SEC13-208ENST00000397109 CCL13Q99616 98 aa12.08□□□□□ -0.48
SEC13-208ENST00000397109 SRRQ9GZT4 340 aa12.08□□□□□ -0.48
SEC13-208ENST00000397109 MS4A7Q9GZW8 240 aaPredicted RBP12.08□□□□□ -0.48
SEC13-208ENST00000397109 NOX4Q9NPH5 578 aa12.08□□□□□ -0.48
SEC13-208ENST00000397109 HHLA2Q9UM44 414 aa12.08□□□□□ -0.48
SEC13-208ENST00000397109 TRBV5-7A0A0A0MS05 114 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 A0A1B0GVG6 124 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 NKX6-3A6NJ46 265 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 SYT7O43581 403 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 NDUFB3O43676 98 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 TPPPO94811 219 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 APOA1P02647 267 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 GLRA1P23415 457 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 CFPP27918 469 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 BPIFB3P59826 476 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 FGF12P61328 243 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 SCN1BQ07699 218 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 LRRC10Q5BKY1 277 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 HAGHLQ6PII5 290 aaPredicted RBP12.07□□□□□ -0.48
SEC13-208ENST00000397109 BAIAP2L2Q6UXY1 529 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 BTN2A1Q7KYR7 527 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 RDH10Q8IZV5 341 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 ST8SIA4Q92187 359 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 AQP3Q92482 292 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 PLEKHA1Q9HB21 404 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 TCF7L1Q9HCS4 588 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 ABCB10Q9NRK6 738 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 RASL12Q9NYN1 266 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 NLKQ9UBE8 527 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 ZNF69Q9UC07 566 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 SPATA2Q9UM82 520 aa12.07□□□□□ -0.48
SEC13-208ENST00000397109 DNHD1Q96M86 4753 aa12.06□□□□□ -0.48
SEC13-208ENST00000397109 CD2P06729 351 aa12.06□□□□□ -0.48
SEC13-208ENST00000397109 CAV3P56539 151 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms