RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 GPR137BO60478 399 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 HIST1H2BKO60814 126 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 OR2J2O76002 312 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 HIST1H2BJP06899 126 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 CTSDP07339 412 aaPredicted RBP12.47□□□□□ -0.41
CLIP2-203ENST00000395060 CD63P08962 238 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 HIST1H2BOP23527 126 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 HIST1H2BBP33778 126 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 BLKP51451 505 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 HIST1H2BDP58876 126 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 HIST1H2BCP62807 126 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 NKX6-1P78426 367 aaPredicted RBP12.47□□□□□ -0.41
CLIP2-203ENST00000395060 GNMTQ14749 295 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 HIST2H2BEQ16778 126 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 IZUMO4Q1ZYL8 232 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 CXorf66Q5JRM2 361 aaPredicted RBP12.47□□□□□ -0.41
CLIP2-203ENST00000395060 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.47□□□□□ -0.41
CLIP2-203ENST00000395060 HIST1H2BHQ93079 126 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 HIST1H2BNQ99877 126 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 HIST1H2BMQ99879 126 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 LMAN1LQ9HAT1 526 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 PNRC2Q9NPJ4 139 aaKnown RBP12.47□□□□□ -0.41
CLIP2-203ENST00000395060 TUBD1Q9UJT1 453 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 HSF4Q9ULV5 492 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 DMRT1Q9Y5R6 373 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 CPAMD8Q8IZJ3 1885 aa12.47□□□□□ -0.41
CLIP2-203ENST00000395060 A0A1W2PPC4 97 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 ZFP92A6NM28 416 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 HLA-HP01893 362 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 MMP9P14780 707 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 EPHA1P21709 976 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 CDX1P47902 265 aaPredicted RBP12.46□□□□□ -0.41
CLIP2-203ENST00000395060 STARD6P59095 220 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 TMEM187Q14656 261 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 KHDC3LQ587J8 217 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 PHYHD1Q5SRE7 291 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 LYPD6BQ8NI32 183 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 MUCL1Q96DR8 90 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 POM121Q96HA1 1249 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 SNX22Q96L94 193 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 A0A1W2PR80 420 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 ANKUB1A6NFN9 424 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 TUBG1P23258 451 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 ESPL1Q14674 2120 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 USF2Q15853 346 aaPredicted RBP12.46□□□□□ -0.41
CLIP2-203ENST00000395060 NECAP1Q8NC96 275 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 OR5C1Q8NGR4 320 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 TMEM171Q8WVE6 324 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 CHST5Q9GZS9 411 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 ALKBH4Q9NXW9 302 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 ANAPC10Q9UM13 185 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 FER1L5A0AVI2 2057 aa12.46□□□□□ -0.41
CLIP2-203ENST00000395060 IGSF23A1L1A6 192 aa12.46□□□□□ -0.42
CLIP2-203ENST00000395060 SERPINE3A8MV23 424 aa12.46□□□□□ -0.42
CLIP2-203ENST00000395060 PPP1R2P9O14990 202 aa12.46□□□□□ -0.42
CLIP2-203ENST00000395060 TRAF3IP2O43734 574 aaPredicted RBP12.46□□□□□ -0.42
CLIP2-203ENST00000395060 NDUFB7P17568 137 aa12.46□□□□□ -0.42
CLIP2-203ENST00000395060 PAX6P26367 422 aa12.46□□□□□ -0.42
CLIP2-203ENST00000395060 FGF8P55075 233 aaPredicted RBP12.46□□□□□ -0.42
CLIP2-203ENST00000395060 RAB11AP62491 216 aa12.46□□□□□ -0.42
CLIP2-203ENST00000395060 ELOBQ15370 118 aa12.46□□□□□ -0.42
CLIP2-203ENST00000395060 NKAIN1Q4KMZ8 207 aa12.46□□□□□ -0.42
CLIP2-203ENST00000395060 ZNF880Q6PDB4 577 aa12.46□□□□□ -0.42
CLIP2-203ENST00000395060 CA5BP1Q8WTZ4 195 aa12.46□□□□□ -0.42
CLIP2-203ENST00000395060 HPSE2Q8WWQ2 592 aa12.46□□□□□ -0.42
CLIP2-203ENST00000395060 C14orf144Q96I85 54 aa12.46□□□□□ -0.42
CLIP2-203ENST00000395060 GFOD1Q9NXC2 390 aa12.46□□□□□ -0.42
CLIP2-203ENST00000395060 P4HTMQ9NXG6 502 aa12.46□□□□□ -0.42
CLIP2-203ENST00000395060 GNG13Q9P2W3 67 aa12.46□□□□□ -0.42
CLIP2-203ENST00000395060 SLC25A24Q6NUK1 477 aa12.45□□□□□ -0.42
CLIP2-203ENST00000395060 FAM89BQ8N5H3 189 aa12.45□□□□□ -0.42
CLIP2-203ENST00000395060 INTS12Q96CB8 462 aaKnown RBP12.45□□□□□ -0.42
CLIP2-203ENST00000395060 GINS3Q9BRX5 216 aa12.45□□□□□ -0.42
CLIP2-203ENST00000395060 TREM2Q9NZC2 230 aa12.45□□□□□ -0.42
CLIP2-203ENST00000395060 FBLN5Q9UBX5 448 aa12.45□□□□□ -0.42
CLIP2-203ENST00000395060 ZNF154Q13106 437 aa12.45□□□□□ -0.42
CLIP2-203ENST00000395060 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.45□□□□□ -0.42
CLIP2-203ENST00000395060 CYB5R2Q6BCY4 276 aa12.45□□□□□ -0.42
CLIP2-203ENST00000395060 FBXL14Q8N1E6 418 aa12.45□□□□□ -0.42
CLIP2-203ENST00000395060 RHBDD1Q8TEB9 315 aa12.45□□□□□ -0.42
CLIP2-203ENST00000395060 HAS2Q92819 552 aa12.45□□□□□ -0.42
CLIP2-203ENST00000395060 ZDHHC12Q96GR4 267 aa12.45□□□□□ -0.42
CLIP2-203ENST00000395060 ZNF385AQ96PM9 386 aaKnown RBP12.45□□□□□ -0.42
CLIP2-203ENST00000395060 UCN2Q96RP3 112 aa12.45□□□□□ -0.42
CLIP2-203ENST00000395060 FGF21Q9NSA1 209 aa12.45□□□□□ -0.42
CLIP2-203ENST00000395060 TMEM131Q92545 1883 aa12.45□□□□□ -0.42
CLIP2-203ENST00000395060 PHOX2AO14813 284 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 GATCO43716 136 aaKnown RBP12.44□□□□□ -0.42
CLIP2-203ENST00000395060 DUSP1P28562 367 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 RPL23AP62750 156 aaKnown RBP12.44□□□□□ -0.42
CLIP2-203ENST00000395060 POC1BQ8TC44 478 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 SLC39A7Q92504 469 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 ZNF442Q9H7R0 627 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 TUBA4BQ9H853 241 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 NECAP2Q9NVZ3 263 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 WSB1Q9Y6I7 421 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 SCAF4O95104 1147 aaKnown RBP12.44□□□□□ -0.42
CLIP2-203ENST00000395060 AADACP22760 399 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 CFHR1Q03591 330 aa12.44□□□□□ -0.42
CLIP2-203ENST00000395060 ZP4Q12836 540 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms