RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 GPR37O15354 613 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 ECDO95905 644 aaPredicted RBP12.3□□□□□ -0.44
COL9A1-204ENST00000370496 HAND1O96004 215 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 CALCBP10092 127 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 SRD5A1P18405 259 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 NEDD8Q15843 81 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 SPIN3Q5JUX0 258 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 PXT1Q8NFP0 134 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 VCX3AQ9NNX9 186 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 GSTK1Q9Y2Q3 226 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 CCRL2O00421 344 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 FCN3O75636 299 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 SC5DO75845 299 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 ARL6IP5O75915 188 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 SFTPBP07988 381 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 UCHL1P09936 223 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 PTGFRP43088 359 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 MTNR1BP49286 362 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 BMXP51813 675 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 COL10A1Q03692 680 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 SSX1Q16384 188 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 PHYHIPQ92561 330 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 MUL1Q969V5 352 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 HMG20AQ9NP66 347 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 EXOSC4Q9NPD3 245 aaKnown RBP12.3□□□□□ -0.44
COL9A1-204ENST00000370496 RPUSD1Q9UJJ7 312 aaKnown RBP12.3□□□□□ -0.44
COL9A1-204ENST00000370496 WNK2Q9Y3S1 2297 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 MAB21L2Q9Y586 359 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 AUP1Q9Y679 476 aa12.3□□□□□ -0.44
COL9A1-204ENST00000370496 A0A1W2PQ09 198 aa12.29□□□□□ -0.44
COL9A1-204ENST00000370496 CDRT1O95170 752 aa12.29□□□□□ -0.44
COL9A1-204ENST00000370496 CSTBP04080 98 aaKnown RBP12.29□□□□□ -0.44
COL9A1-204ENST00000370496 CHRM2P08172 466 aa12.29□□□□□ -0.44
COL9A1-204ENST00000370496 ADRA2CP18825 462 aa12.29□□□□□ -0.44
COL9A1-204ENST00000370496 DUSP1P28562 367 aa12.29□□□□□ -0.44
COL9A1-204ENST00000370496 CAV3P56539 151 aa12.29□□□□□ -0.44
COL9A1-204ENST00000370496 FABP5Q01469 135 aa12.29□□□□□ -0.44
COL9A1-204ENST00000370496 PAX2Q02962 417 aa12.29□□□□□ -0.44
COL9A1-204ENST00000370496 C11orf91Q3C1V1 193 aa12.29□□□□□ -0.44
COL9A1-204ENST00000370496 AWAT2Q6E213 333 aa12.29□□□□□ -0.44
COL9A1-204ENST00000370496 UNQ9370/PRO34162Q6UXP9 181 aa12.29□□□□□ -0.44
COL9A1-204ENST00000370496 TSPAN14Q8NG11 270 aa12.29□□□□□ -0.44
COL9A1-204ENST00000370496 OR10K1Q8NGX5 313 aa12.29□□□□□ -0.44
COL9A1-204ENST00000370496 DACT3Q96B18 629 aaPredicted RBP12.29□□□□□ -0.44
COL9A1-204ENST00000370496 METTL9Q9H1A3 318 aa12.29□□□□□ -0.44
COL9A1-204ENST00000370496 ONECUT1Q9UBC0 465 aa12.29□□□□□ -0.44
COL9A1-204ENST00000370496 ING4Q9UNL4 249 aa12.29□□□□□ -0.44
COL9A1-204ENST00000370496 MRPS28Q9Y2Q9 187 aaKnown RBP12.29□□□□□ -0.44
COL9A1-204ENST00000370496 SF3B6Q9Y3B4 125 aaKnown RBP12.29□□□□□ -0.44
COL9A1-204ENST00000370496 SVEP1Q4LDE5 3571 aa12.28□□□□□ -0.44
COL9A1-204ENST00000370496 KIR2DS1A0A191URI9 304 aa12.28□□□□□ -0.44
COL9A1-204ENST00000370496 MEGF11A6BM72 1044 aa12.28□□□□□ -0.44
COL9A1-204ENST00000370496 SIRPB1O00241 398 aa12.28□□□□□ -0.44
COL9A1-204ENST00000370496 HTR3BO95264 441 aa12.28□□□□□ -0.44
COL9A1-204ENST00000370496 ZNF44P15621 663 aa12.28□□□□□ -0.44
COL9A1-204ENST00000370496 SERPINA2P20848 420 aa12.28□□□□□ -0.44
COL9A1-204ENST00000370496 GABRR1P24046 479 aa12.28□□□□□ -0.44
COL9A1-204ENST00000370496 CALRP27797 417 aaKnown RBP12.28□□□□□ -0.44
COL9A1-204ENST00000370496 FGF12P61328 243 aa12.28□□□□□ -0.44
COL9A1-204ENST00000370496 ZNF146Q15072 292 aa12.28□□□□□ -0.44
COL9A1-204ENST00000370496 TMEM91Q6ZNR0 172 aa12.28□□□□□ -0.44
COL9A1-204ENST00000370496 C1QL2Q7Z5L3 287 aa12.28□□□□□ -0.44
COL9A1-204ENST00000370496 CDH26Q8IXH8 852 aa12.28□□□□□ -0.44
COL9A1-204ENST00000370496 FAM185AQ8N0U4 392 aa12.28□□□□□ -0.44
COL9A1-204ENST00000370496 DCTN5Q9BTE1 182 aa12.28□□□□□ -0.44
COL9A1-204ENST00000370496 FAM234AQ9H0X4 552 aa12.28□□□□□ -0.44
COL9A1-204ENST00000370496 CNTD2Q9H8S5 307 aa12.28□□□□□ -0.44
COL9A1-204ENST00000370496 A0A087WXM4 84 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 TRBV23-1A0A0A0MS06 115 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 SH2D1BO14796 132 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 ZNF780AO75290 641 aaPredicted RBP12.27□□□□□ -0.45
COL9A1-204ENST00000370496 AVPP01185 164 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 TK1P04183 234 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 LIPFP07098 398 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 FAM157CP0CG43 387 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 PPIAL4GP0DN37 164 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 SRMP19623 302 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 RIPPLY3P57055 190 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 SCN1BQ07699 218 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 SCGB2A2Q13296 93 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 EDDM3AQ14507 147 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 SLC22A6Q4U2R8 563 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 METTL11BQ5VVY1 283 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 GLT8D1Q68CQ7 371 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 ELP2Q6IA86 826 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 GLIPR1L1Q6UWM5 242 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 GDPD3Q7L5L3 318 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 LRRTM1Q86UE6 522 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 NR1H4Q96RI1 486 aaPredicted RBP12.27□□□□□ -0.45
COL9A1-204ENST00000370496 UQCC2Q9BRT2 126 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 PPIL3Q9H2H8 161 aaKnown RBP12.27□□□□□ -0.45
COL9A1-204ENST00000370496 ZNF696Q9H7X3 374 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 PCDHB16Q9NRJ7 776 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 IL36GQ9NZH8 169 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 OPN4Q9UHM6 478 aa12.27□□□□□ -0.45
COL9A1-204ENST00000370496 OR2H2O95918 312 aa12.26□□□□□ -0.45
COL9A1-204ENST00000370496 MYL9P24844 172 aa12.26□□□□□ -0.45
COL9A1-204ENST00000370496 GP2P55259 537 aaKnown RBP12.26□□□□□ -0.45
COL9A1-204ENST00000370496 EDDM3BP56851 147 aa12.26□□□□□ -0.45
COL9A1-204ENST00000370496 PAX8Q06710 450 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms