RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 SIRPB1O00241 398 aa9.91□□□□□ -0.82
SMARCE1-202ENST00000348513 ISXQ2M1V0 245 aa9.91□□□□□ -0.82
SMARCE1-202ENST00000348513 PRSS54Q6PEW0 395 aa9.91□□□□□ -0.82
SMARCE1-202ENST00000348513 OR51H1Q8NH63 302 aa9.91□□□□□ -0.82
SMARCE1-202ENST00000348513 OLIG1Q8TAK6 271 aa9.91□□□□□ -0.82
SMARCE1-202ENST00000348513 LHX4Q969G2 390 aa9.91□□□□□ -0.82
SMARCE1-202ENST00000348513 MAP1LC3CQ9BXW4 147 aa9.91□□□□□ -0.82
SMARCE1-202ENST00000348513 BARHL1Q9BZE3 327 aa9.91□□□□□ -0.82
SMARCE1-202ENST00000348513 LAT2Q9GZY6 243 aa9.91□□□□□ -0.82
SMARCE1-202ENST00000348513 CNTD2Q9H8S5 307 aa9.91□□□□□ -0.82
SMARCE1-202ENST00000348513 WBP1LQ9NX94 342 aa9.91□□□□□ -0.82
SMARCE1-202ENST00000348513 KLK11Q9UBX7 282 aa9.91□□□□□ -0.82
SMARCE1-202ENST00000348513 PROCRQ9UNN8 238 aa9.91□□□□□ -0.82
SMARCE1-202ENST00000348513 HIST1H1EP10412 219 aaKnown RBP9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 GAGE1Q13065 139 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 DUSP8Q13202 625 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 SVIPQ8NHG7 77 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 VCX2Q9H322 139 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 HINT3Q9NQE9 182 aaKnown RBP9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 PLA2G3Q9NZ20 509 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 FBXO4Q9UKT5 387 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 B3GALT5Q9Y2C3 310 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 ZFP30Q9Y2G7 519 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 R4GN57 208 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 SPTY2D1-AS1A0A0U1RR47 76 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 FAM221AA4D161 298 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 GPM6AP51674 278 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 RPL11P62913 178 aaKnown RBP9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 IHHQ14623 411 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 GUSBP11Q6P575 273 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 OR2I1PQ8NGU4 316 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 PIK3IP1Q96FE7 263 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 SMDT1Q9H4I9 107 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 PLSCR4Q9NRQ2 329 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 NECAP2Q9NVZ3 263 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 P4HTMQ9NXG6 502 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 EPHA8P29322 1005 aaPredicted RBP9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 TFF2Q03403 129 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 MYBPHQ13203 477 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 AGERQ15109 404 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 RTL8AQ9BWD3 113 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 HPRT1P00492 218 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 FPR2P25090 351 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 NKX2-1P43699 371 aaPredicted RBP9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 LAMTOR1Q6IAA8 161 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 WDR5BQ86VZ2 330 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 BOD1Q96IK1 185 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 CDC42EP3Q9UKI2 254 aa9.9□□□□□ -0.82
SMARCE1-202ENST00000348513 M0R296 226 aa9.9□□□□□ -0.83
SMARCE1-202ENST00000348513 CTDSPLO15194 276 aa9.9□□□□□ -0.83
SMARCE1-202ENST00000348513 FGF9P31371 208 aaPredicted RBP9.9□□□□□ -0.83
SMARCE1-202ENST00000348513 CD96P40200 585 aa9.9□□□□□ -0.83
SMARCE1-202ENST00000348513 GPNMBQ14956 572 aa9.9□□□□□ -0.83
SMARCE1-202ENST00000348513 MESTQ5EB52 335 aa9.9□□□□□ -0.83
SMARCE1-202ENST00000348513 VAX2Q9UIW0 290 aa9.9□□□□□ -0.83
SMARCE1-202ENST00000348513 BSXQ3C1V8 233 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 TUSC5Q8IXB3 177 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 OR1L6Q8NGR2 347 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 OR13C6PQ8NH95 151 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 SLC17A4Q9Y2C5 497 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 RCL1Q9Y2P8 373 aaKnown RBP9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 CHTOPQ9Y3Y2 248 aaKnown RBP9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 TIMM10BQ9Y5J6 103 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 TRAV1-2A0A0B4J238 106 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 IGHV2-70P01814 119 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 SRP14P37108 136 aaKnown RBP9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 TDGF1P3P51864 188 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 Q7L0L9 218 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 DOK3Q7L591 496 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 SFTPA1Q8IWL2 248 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 MOB3AQ96BX8 217 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 TIMP4Q99727 224 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 NMES1Q9C002 83 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 TNFSF18Q9UNG2 199 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 TRBV5-4A0A0C4DH59 114 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 KLK10O43240 276 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 PF4V1P10720 104 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 PRPH2P23942 346 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 NPBWR2P48146 333 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 SLC25A35Q3KQZ1 300 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 NKAIN3Q8N8D7 197 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 ABHD3Q8WU67 409 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 EGLN1Q9GZT9 426 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 MYO5AQ9Y4I1 1855 aaKnown RBP9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 J3KRW8 73 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 B4GALT1P15291 398 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 CNRIP1Q96F85 164 aaPredicted RBP9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 FGF20Q9NP95 211 aaPredicted RBP9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 HEYLQ9NQ87 328 aaPredicted RBP9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 CA10Q9NS85 328 aa9.89□□□□□ -0.83
SMARCE1-202ENST00000348513 GLRA1P23415 457 aa9.88□□□□□ -0.83
SMARCE1-202ENST00000348513 CDAP32320 146 aa9.88□□□□□ -0.83
SMARCE1-202ENST00000348513 YBX1P67809 324 aaKnown RBP9.88□□□□□ -0.83
SMARCE1-202ENST00000348513 FOXF1Q12946 379 aa9.88□□□□□ -0.83
SMARCE1-202ENST00000348513 OR52N5Q8NH56 324 aa9.88□□□□□ -0.83
SMARCE1-202ENST00000348513 OR10J5Q8NHC4 309 aa9.88□□□□□ -0.83
SMARCE1-202ENST00000348513 NTNG2Q96CW9 530 aa9.88□□□□□ -0.83
SMARCE1-202ENST00000348513 OR5AC2Q9NZP5 309 aa9.88□□□□□ -0.83
SMARCE1-202ENST00000348513 C4orf47A7E2U8 309 aa9.88□□□□□ -0.83
SMARCE1-202ENST00000348513 SRSF5Q13243 272 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms