RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 CD177Q8N6Q3 437 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 PERPQ96FX8 193 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 CMTM3Q96MX0 182 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 WDFY2Q96P53 400 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 DLL4Q9NR61 685 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 PCDHB16Q9NRJ7 776 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 NLKQ9UBE8 527 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 OR14J1Q9UGF5 321 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 WIPI2Q9Y4P8 454 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 APCP25054 2843 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 ABCA12Q86UK0 2595 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 IGKV1D-17A0A075B6S4 117 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 PPIAL4EA0A075B759 164 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 OOEPA6NGQ2 149 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 RFPL4AA6NLU0 287 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 PPIAL4DF5H284 164 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 RFPL4AL1F8VTS6 287 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 IFNL4K9M1U5 179 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 LGALS8O00214 317 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 SSX4O60224 188 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 KNG1P01042 644 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 PPIAL4FP0DN26 164 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 CDK2P24941 298 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 IL13RA2Q14627 380 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 ZNF146Q15072 292 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 ZMYND11Q15326 602 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 CARTPTQ16568 116 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 SMIM21Q3B7S5 101 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 AVPI1Q5T686 147 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 LRRC28Q86X40 367 aaPredicted RBP15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 C1orf87Q8N0U7 546 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 ZNF525Q8N782 197 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 URM1Q9BTM9 101 aaKnown RBP15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 EXTL2Q9UBQ6 330 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 DNAJB11Q9UBS4 358 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 ZNF222Q9UK12 451 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 PPIAL4AQ9Y536 164 aa15.9■□□□□ 0.14
CHMP4A-201ENST00000347519 A0A1B0GW55 424 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 OR2AT4A6NND4 320 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 GYPAP02724 150 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 DUX4L2P0CJ85 424 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 DUX4L3P0CJ86 424 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 DUX4L4P0CJ87 422 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 DUX4L5P0CJ88 424 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 DUX4L6P0CJ89 424 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 DUX4L7P0CJ90 424 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 CPT2P23786 658 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 PITPNBP48739 271 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 ATP5J2P56134 94 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 SCN1BQ07699 218 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 IKZF1Q13422 519 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 PLAC9Q5JTB6 97 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 STUMQ69YW2 141 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 BRICD5Q6PL45 260 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 DUX4L9Q6RFH8 374 aaPredicted RBP15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 CCDC190Q86UF4 302 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 ANGPTL6Q8NI99 470 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 RAB40AQ8WXH6 277 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 TMEM165Q9HC07 324 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 DUX4Q9UBX2 424 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 POLQO75417 2590 aa15.89■□□□□ 0.13
CHMP4A-201ENST00000347519 CLDN25C9JDP6 229 aa15.88■□□□□ 0.13
CHMP4A-201ENST00000347519 SIRPB1O00241 398 aa15.88■□□□□ 0.13
CHMP4A-201ENST00000347519 TNFRSF13BO14836 293 aaPredicted RBP15.88■□□□□ 0.13
CHMP4A-201ENST00000347519 OR7C1O76099 320 aaPredicted RBP15.88■□□□□ 0.13
CHMP4A-201ENST00000347519 HAND1O96004 215 aa15.88■□□□□ 0.13
CHMP4A-201ENST00000347519 IGHV2-70P01814 119 aa15.88■□□□□ 0.13
CHMP4A-201ENST00000347519 BLVRBP30043 206 aaPredicted RBP15.88■□□□□ 0.13
CHMP4A-201ENST00000347519 S100A5P33763 92 aa15.88■□□□□ 0.13
CHMP4A-201ENST00000347519 OLFML2AQ68BL7 652 aa15.88■□□□□ 0.13
CHMP4A-201ENST00000347519 OR10R2Q8NGX6 335 aa15.88■□□□□ 0.13
CHMP4A-201ENST00000347519 S100A16Q96FQ6 103 aaKnown RBP15.88■□□□□ 0.13
CHMP4A-201ENST00000347519 DIRAS2Q96HU8 199 aa15.88■□□□□ 0.13
CHMP4A-201ENST00000347519 LURAP1Q96LR2 239 aa15.88■□□□□ 0.13
CHMP4A-201ENST00000347519 SOSTQ9BQB4 213 aa15.88■□□□□ 0.13
CHMP4A-201ENST00000347519 GSX2Q9BZM3 304 aa15.88■□□□□ 0.13
CHMP4A-201ENST00000347519 CHODLQ9H9P2 273 aa15.88■□□□□ 0.13
CHMP4A-201ENST00000347519 ELF5Q9UKW6 265 aaPredicted RBP15.88■□□□□ 0.13
CHMP4A-201ENST00000347519 ARID1AO14497 2285 aa15.88■□□□□ 0.13
CHMP4A-201ENST00000347519 TRAV24A0A0B4J272 114 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 METTL21EPA6NDL7 271 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 PPIHO43447 177 aaKnown RBP15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 OR2H2O95918 312 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 PTHLHP12272 177 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 CHATP28329 748 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 PRDX2P32119 198 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 BTG1P62324 171 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 LSAMPQ13449 338 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 MPV17LQ2QL34 196 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 SPIN3Q5JUX0 258 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 LYPD2Q6UXB3 125 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 MFSD4AQ8N468 514 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 OR56B1Q8NGI3 324 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 ARHGAP5-AS1Q96IT6 56 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 CCL13Q99616 98 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 ZMAT3Q9HA38 289 aaKnown RBP15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 ADAM30Q9UKF2 790 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 KCNK7Q9Y2U2 307 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 TRAV18A0A075B6X5 111 aa15.87■□□□□ 0.13
CHMP4A-201ENST00000347519 TMEM82A0PJX8 343 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms