RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 RGS10O43665 173 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 NDUFA2O43678 99 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 ZNF737O75373 536 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 TOX4O94842 621 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 IGFBP3P17936 291 aaPredicted RBP9.9□□□□□ -0.82
SCFD1-201ENST00000311943 EEF1B2P24534 225 aaKnown RBP9.9□□□□□ -0.82
SCFD1-201ENST00000311943 EDDM3AQ14507 147 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 KCNJ8Q15842 424 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 SMIM21Q3B7S5 101 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 LHFPL2Q6ZUX7 228 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 VMO1Q7Z5L0 202 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 RTN4RL2Q86UN3 420 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 FAM185AQ8N0U4 392 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 PIP4P2Q8N4L2 257 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 C11orf42Q8N5U0 333 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 SPSB1Q96BD6 273 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 C10orf35Q96D05 121 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 DERL3Q96Q80 235 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 RAB26Q9ULW5 256 aa9.9□□□□□ -0.82
SCFD1-201ENST00000311943 TRBV5-7A0A0A0MS05 114 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 ZNF879B4DU55 563 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 ENSAO43768 121 aaKnown RBP9.89□□□□□ -0.83
SCFD1-201ENST00000311943 TK1P04183 234 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 RAB3AP20336 220 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 PRKACBP22694 351 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 Q499Y3 187 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 LRRC10Q5BKY1 277 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 TMEM200BQ69YZ2 307 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 PHC2Q8IXK0 858 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 FAM58AQ8N1B3 248 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 SIGLECL1Q8N7X8 197 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 TNFAIP8L1Q8WVP5 186 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 MYDGFQ969H8 173 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 UPRTQ96BW1 309 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 VCX3BQ9H321 246 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 CNTD2Q9H8S5 307 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 HMG20AQ9NP66 347 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 TRAV39A0A0B4J263 110 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 NKX6-3A6NJ46 265 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 RNASEK-C17orf49H0YIS7 233 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 J3QLI3 93 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 HAND1O96004 215 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 TGFBR2P37173 567 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 NPY4RP50391 375 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 EDDM3BP56851 147 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 EMX1Q04741 257 aaPredicted RBP9.89□□□□□ -0.83
SCFD1-201ENST00000311943 SSX1Q16384 188 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 ACSM3Q53FZ2 586 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 DDI2Q5TDH0 399 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 ZNF782Q6ZMW2 699 aaPredicted RBP9.89□□□□□ -0.83
SCFD1-201ENST00000311943 TMEM91Q6ZNR0 172 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 BPIFB2Q8N4F0 458 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 OR4D6Q8NGJ1 314 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 GPER1Q99527 375 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 MND1Q9BWT6 205 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 NUP50Q9UKX7 468 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 TPRKBQ9Y3C4 175 aa9.89□□□□□ -0.83
SCFD1-201ENST00000311943 A0A1W2PQ09 198 aa9.88□□□□□ -0.83
SCFD1-201ENST00000311943 MMP23AO75900 390 aa9.88□□□□□ -0.83
SCFD1-201ENST00000311943 KDM4BO94953 1096 aa9.88□□□□□ -0.83
SCFD1-201ENST00000311943 OR2H2O95918 312 aa9.88□□□□□ -0.83
SCFD1-201ENST00000311943 KNG1P01042 644 aa9.88□□□□□ -0.83
SCFD1-201ENST00000311943 GATA3P23771 443 aa9.88□□□□□ -0.83
SCFD1-201ENST00000311943 MRPL28Q13084 256 aaKnown RBP9.88□□□□□ -0.83
SCFD1-201ENST00000311943 DEFB112Q30KQ8 113 aa9.88□□□□□ -0.83
SCFD1-201ENST00000311943 YIF1BQ5BJH7 314 aa9.88□□□□□ -0.83
SCFD1-201ENST00000311943 HCP5Q6MZN7 132 aa9.88□□□□□ -0.83
SCFD1-201ENST00000311943 C5orf24Q7Z6I8 188 aa9.88□□□□□ -0.83
SCFD1-201ENST00000311943 ZDHHC22Q8N966 263 aa9.88□□□□□ -0.83
SCFD1-201ENST00000311943 CCDC54Q8NEL0 328 aa9.88□□□□□ -0.83
SCFD1-201ENST00000311943 TNFRSF14Q92956 283 aa9.88□□□□□ -0.83
SCFD1-201ENST00000311943 PPA2Q9H2U2 334 aa9.88□□□□□ -0.83
SCFD1-201ENST00000311943 RASL12Q9NYN1 266 aa9.88□□□□□ -0.83
SCFD1-201ENST00000311943 ING4Q9UNL4 249 aa9.88□□□□□ -0.83
SCFD1-201ENST00000311943 KIAA2026Q5HYC2 2103 aa9.88□□□□□ -0.83
SCFD1-201ENST00000311943 SHISA3A0PJX4 238 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 FAM172BPA6NC97 362 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 DENRO43583 198 aaKnown RBP9.87□□□□□ -0.83
SCFD1-201ENST00000311943 GABRR1P24046 479 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 ZNF93P35789 620 aaPredicted RBP9.87□□□□□ -0.83
SCFD1-201ENST00000311943 AESQ08117 197 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 OR10K2Q6IF99 312 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 FAM53AQ6NSI3 398 aaPredicted RBP9.87□□□□□ -0.83
SCFD1-201ENST00000311943 Q6P435 159 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 LYPD6Q86Y78 171 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 MKXQ8IYA7 352 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 MUL1Q969V5 352 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 MED30Q96HR3 178 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 GFI1Q99684 422 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 ACOT13Q9NPJ3 140 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 SF3B6Q9Y3B4 125 aaKnown RBP9.87□□□□□ -0.83
SCFD1-201ENST00000311943 A0A0U1RQK1 487 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 K7N7A8 449 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 HTR3BO95264 441 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 JUNBP17275 347 aaPredicted RBP9.87□□□□□ -0.83
SCFD1-201ENST00000311943 SERPINA2P20848 420 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 PCMT1P22061 227 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 BDKRB2P30411 391 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 OR3A1P47881 315 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 CAV3P56539 151 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms