RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 GLIPR1L1Q6UWM5 242 aa18.58■□□□□ 0.56
HOXD4-201ENST00000306324 ZNRF1Q8ND25 227 aa18.58■□□□□ 0.56
HOXD4-201ENST00000306324 ST8SIA4Q92187 359 aa18.58■□□□□ 0.56
HOXD4-201ENST00000306324 SDSLQ96GA7 329 aa18.58■□□□□ 0.56
HOXD4-201ENST00000306324 METRNQ9UJH8 293 aa18.58■□□□□ 0.56
HOXD4-201ENST00000306324 TRAV1-2A0A0B4J238 106 aa18.57■□□□□ 0.56
HOXD4-201ENST00000306324 SHISA3A0PJX4 238 aa18.57■□□□□ 0.56
HOXD4-201ENST00000306324 A8MXK9 166 aa18.57■□□□□ 0.56
HOXD4-201ENST00000306324 FGF12P61328 243 aa18.57■□□□□ 0.56
HOXD4-201ENST00000306324 DGUOKQ16854 277 aa18.57■□□□□ 0.56
HOXD4-201ENST00000306324 LRRC10Q5BKY1 277 aa18.57■□□□□ 0.56
HOXD4-201ENST00000306324 GLCCI1Q86VQ1 547 aa18.57■□□□□ 0.56
HOXD4-201ENST00000306324 FGFRL1Q8N441 504 aa18.57■□□□□ 0.56
HOXD4-201ENST00000306324 TMEM185AQ8NFB2 350 aa18.57■□□□□ 0.56
HOXD4-201ENST00000306324 TMEM186Q96B77 213 aa18.57■□□□□ 0.56
HOXD4-201ENST00000306324 YIPF6Q96EC8 236 aa18.57■□□□□ 0.56
HOXD4-201ENST00000306324 GFI1Q99684 422 aa18.57■□□□□ 0.56
HOXD4-201ENST00000306324 PLGRKTQ9HBL7 147 aa18.57■□□□□ 0.56
HOXD4-201ENST00000306324 YAE1D1Q9NRH1 226 aa18.57■□□□□ 0.56
HOXD4-201ENST00000306324 HIF1ANQ9NWT6 349 aa18.57■□□□□ 0.56
HOXD4-201ENST00000306324 OR5V1Q9UGF6 321 aa18.57■□□□□ 0.56
HOXD4-201ENST00000306324 GLS2Q9UI32 602 aa18.57■□□□□ 0.56
HOXD4-201ENST00000306324 MAB21L2Q9Y586 359 aa18.57■□□□□ 0.56
HOXD4-201ENST00000306324 SONP18583 2426 aaKnown RBP18.57■□□□□ 0.56
HOXD4-201ENST00000306324 KIAA1324LA8MWY0 1029 aaPredicted RBP18.56■□□□□ 0.56
HOXD4-201ENST00000306324 PDCD5O14737 125 aa18.56■□□□□ 0.56
HOXD4-201ENST00000306324 FCN3O75636 299 aa18.56■□□□□ 0.56
HOXD4-201ENST00000306324 HAND1O96004 215 aa18.56■□□□□ 0.56
HOXD4-201ENST00000306324 BMXP51813 675 aa18.56■□□□□ 0.56
HOXD4-201ENST00000306324 CAPZA1P52907 286 aa18.56■□□□□ 0.56
HOXD4-201ENST00000306324 COL10A1Q03692 680 aa18.56■□□□□ 0.56
HOXD4-201ENST00000306324 ZNF146Q15072 292 aa18.56■□□□□ 0.56
HOXD4-201ENST00000306324 TIMM50Q3ZCQ8 353 aa18.56■□□□□ 0.56
HOXD4-201ENST00000306324 SPIN3Q5JUX0 258 aa18.56■□□□□ 0.56
HOXD4-201ENST00000306324 ELP2Q6IA86 826 aa18.56■□□□□ 0.56
HOXD4-201ENST00000306324 ZNF561Q8N587 486 aa18.56■□□□□ 0.56
HOXD4-201ENST00000306324 IL36GQ9NZH8 169 aa18.56■□□□□ 0.56
HOXD4-201ENST00000306324 SLC25A10Q9UBX3 287 aaPredicted RBP18.56■□□□□ 0.56
HOXD4-201ENST00000306324 HIVEP2P31629 2446 aa18.56■□□□□ 0.56
HOXD4-201ENST00000306324 MTORP42345 2549 aa18.55■□□□□ 0.56
HOXD4-201ENST00000306324 TRAV20A0A0B4J274 112 aa18.55■□□□□ 0.56
HOXD4-201ENST00000306324 ZNF780AO75290 641 aaPredicted RBP18.55■□□□□ 0.56
HOXD4-201ENST00000306324 CHRM2P08172 466 aa18.55■□□□□ 0.56
HOXD4-201ENST00000306324 HTR2CP28335 458 aa18.55■□□□□ 0.56
HOXD4-201ENST00000306324 C1orf100Q5SVJ3 147 aa18.55■□□□□ 0.56
HOXD4-201ENST00000306324 ASCC1Q8N9N2 400 aaKnown RBP18.55■□□□□ 0.56
HOXD4-201ENST00000306324 TBC1D15Q8TC07 691 aa18.55■□□□□ 0.56
HOXD4-201ENST00000306324 KCTD7Q96MP8 289 aa18.55■□□□□ 0.56
HOXD4-201ENST00000306324 CENPOQ9BU64 300 aa18.55■□□□□ 0.56
HOXD4-201ENST00000306324 RNF167Q9H6Y7 350 aa18.55■□□□□ 0.56
HOXD4-201ENST00000306324 PCDHB16Q9NRJ7 776 aa18.55■□□□□ 0.56
HOXD4-201ENST00000306324 KCNS2Q9ULS6 477 aa18.55■□□□□ 0.56
HOXD4-201ENST00000306324 V9GY05 133 aa18.55■□□□□ 0.56
HOXD4-201ENST00000306324 A0A1W2PP11 408 aa18.54■□□□□ 0.56
HOXD4-201ENST00000306324 SH2D1BO14796 132 aa18.54■□□□□ 0.56
HOXD4-201ENST00000306324 AIREO43918 545 aa18.54■□□□□ 0.56
HOXD4-201ENST00000306324 NDUFB7P17568 137 aa18.54■□□□□ 0.56
HOXD4-201ENST00000306324 RAB3BP20337 219 aa18.54■□□□□ 0.56
HOXD4-201ENST00000306324 DVL1P1P54792 670 aaPredicted RBP18.54■□□□□ 0.56
HOXD4-201ENST00000306324 SCN1BQ07699 218 aa18.54■□□□□ 0.56
HOXD4-201ENST00000306324 GPR176Q14439 515 aa18.54■□□□□ 0.56
HOXD4-201ENST00000306324 OSR2Q8N2R0 312 aa18.54■□□□□ 0.56
HOXD4-201ENST00000306324 OR6M1Q8NGM8 313 aa18.54■□□□□ 0.56
HOXD4-201ENST00000306324 OR13F1Q8NGS4 319 aa18.54■□□□□ 0.56
HOXD4-201ENST00000306324 MMP26Q9NRE1 261 aa18.54■□□□□ 0.56
HOXD4-201ENST00000306324 DSCAML1Q8TD84 2053 aa18.54■□□□□ 0.56
HOXD4-201ENST00000306324 LOC105371242A0A075B767 164 aa18.53■□□□□ 0.56
HOXD4-201ENST00000306324 SMIM30A4D0T7 59 aa18.53■□□□□ 0.56
HOXD4-201ENST00000306324 PSMD7P51665 324 aa18.53■□□□□ 0.56
HOXD4-201ENST00000306324 OR10A3P58181 314 aa18.53■□□□□ 0.56
HOXD4-201ENST00000306324 PDCD1Q15116 288 aa18.53■□□□□ 0.56
HOXD4-201ENST00000306324 PIGYQ3MUY2 71 aa18.53■□□□□ 0.56
HOXD4-201ENST00000306324 DCAF12L2Q5VW00 463 aa18.53■□□□□ 0.56
HOXD4-201ENST00000306324 BTN2A1Q7KYR7 527 aa18.53■□□□□ 0.56
HOXD4-201ENST00000306324 Q8NFD4 153 aa18.53■□□□□ 0.56
HOXD4-201ENST00000306324 OR51T1Q8NGJ9 327 aa18.53■□□□□ 0.56
HOXD4-201ENST00000306324 H1FXQ92522 213 aaKnown RBP18.53■□□□□ 0.56
HOXD4-201ENST00000306324 C1orf147Q96MC9 270 aaPredicted RBP18.53■□□□□ 0.56
HOXD4-201ENST00000306324 FUNDC2Q9BWH2 189 aa18.53■□□□□ 0.56
HOXD4-201ENST00000306324 ST3GAL6Q9Y274 331 aa18.53■□□□□ 0.56
HOXD4-201ENST00000306324 POLR3KQ9Y2Y1 108 aaPredicted RBP18.53■□□□□ 0.56
HOXD4-201ENST00000306324 SVEP1Q4LDE5 3571 aa18.52■□□□□ 0.56
HOXD4-201ENST00000306324 A8MV72 311 aaPredicted RBP18.52■□□□□ 0.56
HOXD4-201ENST00000306324 SIRPB1O00241 398 aa18.52■□□□□ 0.56
HOXD4-201ENST00000306324 SLC17A2O00624 439 aa18.52■□□□□ 0.56
HOXD4-201ENST00000306324 SLC22A1O15245 554 aa18.52■□□□□ 0.56
HOXD4-201ENST00000306324 OR2H2O95918 312 aa18.52■□□□□ 0.56
HOXD4-201ENST00000306324 TFAP2AP05549 437 aa18.52■□□□□ 0.56
HOXD4-201ENST00000306324 CD37P11049 281 aa18.52■□□□□ 0.56
HOXD4-201ENST00000306324 GTF2F2P13984 249 aa18.52■□□□□ 0.56
HOXD4-201ENST00000306324 ZNF44P15621 663 aa18.52■□□□□ 0.56
HOXD4-201ENST00000306324 LSM3P62310 102 aaKnown RBP18.52■□□□□ 0.56
HOXD4-201ENST00000306324 CD276Q5ZPR3 534 aa18.52■□□□□ 0.56
HOXD4-201ENST00000306324 GDPGP1Q6ZNW5 385 aa18.52■□□□□ 0.56
HOXD4-201ENST00000306324 GHRLQ9UBU3 117 aa18.52■□□□□ 0.56
HOXD4-201ENST00000306324 NSD1Q96L73 2696 aaPredicted RBP18.52■□□□□ 0.56
HOXD4-201ENST00000306324 ANK3Q12955 4377 aaKnown RBP18.52■□□□□ 0.55
HOXD4-201ENST00000306324 A0A0G2JMP0 313 aa18.52■□□□□ 0.55
HOXD4-201ENST00000306324 A0A0X1KG70 313 aa18.52■□□□□ 0.55
HOXD4-201ENST00000306324 C22orf46C9J442 243 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms