RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 A0A087WUJ7 227 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 HIST1H1EP10412 219 aaKnown RBP9.27□□□□□ -0.93
CLIP1-201ENST00000302528 HLA-GP17693 338 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 COMPP49747 757 aaPredicted RBP9.27□□□□□ -0.93
CLIP1-201ENST00000302528 MMP15P51511 669 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 BSXQ3C1V8 233 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 COL5A1-AS1Q5SY13 56 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 Q8WTZ3 238 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 STARD4Q96DR4 205 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 VN1R1Q9GZP7 353 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 ZNF385DQ9H6B1 395 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 POMT2Q9UKY4 750 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 M0QZK8 103 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 RAB29O14966 203 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 SMPD2O60906 423 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 GGCTO75223 188 aaKnown RBP9.27□□□□□ -0.93
CLIP1-201ENST00000302528 IGHV3-13P01766 116 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 IGHV3-7P01780 117 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 ID1P41134 155 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 KLF3P57682 345 aaPredicted RBP9.27□□□□□ -0.93
CLIP1-201ENST00000302528 FUT7Q11130 342 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 SPANXN1Q5VSR9 72 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 OR2W3Q7Z3T1 314 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 BCL7CQ8WUZ0 217 aaPredicted RBP9.27□□□□□ -0.93
CLIP1-201ENST00000302528 PTX4Q96A99 478 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 ELSPBP1Q96BH3 223 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 MANBALQ9NQG1 85 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 C1RLQ9NZP8 487 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 CES1P1Q9UKY3 287 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 COL2A1P02458 1487 aaPredicted RBP9.27□□□□□ -0.93
CLIP1-201ENST00000302528 BCORQ6W2J9 1755 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 TRAV1-2A0A0B4J238 106 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 TMEM127O75204 238 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 CD99P14209 185 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 KCNMB1Q16558 191 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 PRSS8Q16651 343 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 TMEM215Q68D42 235 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 MRPL54Q6P161 138 aaKnown RBP9.27□□□□□ -0.93
CLIP1-201ENST00000302528 DLEU7Q6UYE1 221 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 OR5AU1Q8NGC0 362 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 MRGPRDQ8TDS7 321 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 ARHGAP5-AS1Q96IT6 56 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 ZBP1Q9H171 429 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 SLC26A1Q9H2B4 701 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 PLA2G3Q9NZ20 509 aa9.27□□□□□ -0.93
CLIP1-201ENST00000302528 A0A087X0M5 115 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 A0A1B0GX30 115 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 M0R296 226 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 LMX1BO60663 402 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 SFT2D2O95562 160 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 RPLP1P05386 114 aaKnown RBP9.26□□□□□ -0.93
CLIP1-201ENST00000302528 CLDN18P56856 261 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 RTP5Q14D33 572 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 PSG5Q15238 335 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 RNPS1Q15287 305 aaKnown RBP9.26□□□□□ -0.93
CLIP1-201ENST00000302528 OR4S2Q8NH73 311 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 SNRNP40Q96DI7 357 aaKnown RBP9.26□□□□□ -0.93
CLIP1-201ENST00000302528 TMUB1Q9BVT8 246 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 CNTD2Q9H8S5 307 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 ITGB4P16144 1822 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 ELOA3CA0A087WX78 387 aaPredicted RBP9.26□□□□□ -0.93
CLIP1-201ENST00000302528 TMEM238LA0A1B0GVL6 79 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 A6NJY4 79 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 NMUP48645 174 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 HLA-BQ31612 363 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 ZBTB37Q5TC79 503 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 PRSS42Q7Z5A4 293 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 OR2C3Q8N628 320 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 ANAPC16Q96DE5 110 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 TM4SF19Q96DZ7 209 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 LOC107984156A0A0G2JMH3 177 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 KLRB1Q12918 225 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 RRN3P1Q2M238 152 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 MAVSQ7Z434 540 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 ARL17AQ8IVW1 177 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 FBXL6Q8N531 539 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 OR2D3Q8NGH3 330 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 ADTRPQ96IZ2 230 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 OR6C3Q9NZP0 311 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 DOCK2Q92608 1830 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 KISS1Q15726 138 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 LDLRAD1Q5T700 205 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 TMEM211Q6ICI0 200 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 NUP37Q8NFH4 326 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 RAB24Q969Q5 203 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 PHF7Q9BWX1 381 aaPredicted RBP9.26□□□□□ -0.93
CLIP1-201ENST00000302528 TEX101Q9BY14 249 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 ZNF552Q9H707 407 aaPredicted RBP9.26□□□□□ -0.93
CLIP1-201ENST00000302528 ZFP30Q9Y2G7 519 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 MAST2Q6P0Q8 1798 aa9.26□□□□□ -0.93
CLIP1-201ENST00000302528 K7ERU9 68 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 UPK1AO00322 258 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 SBK3P0C264 359 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 ZNF25P17030 456 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-201ENST00000302528 CCR2P41597 374 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 METAP1P53582 386 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 TCTAP57738 103 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 ROM1Q03395 351 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 RAB32Q13637 225 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 IL13RA2Q14627 380 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms