RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 FBXW12Q6X9E4 464 aa21.12■□□□□ 0.97
SPTSSA-201ENST00000298130 CACFD1Q9UGQ2 172 aa21.12■□□□□ 0.97
SPTSSA-201ENST00000298130 DVL1P1P54792 670 aaPredicted RBP21.12■□□□□ 0.97
SPTSSA-201ENST00000298130 RAB35Q15286 201 aa21.12■□□□□ 0.97
SPTSSA-201ENST00000298130 AAED1Q7RTV5 226 aa21.12■□□□□ 0.97
SPTSSA-201ENST00000298130 OSR2Q8N2R0 312 aa21.12■□□□□ 0.97
SPTSSA-201ENST00000298130 TP53RKQ96S44 253 aa21.12■□□□□ 0.97
SPTSSA-201ENST00000298130 TMEM38BQ9NVV0 291 aa21.12■□□□□ 0.97
SPTSSA-201ENST00000298130 FBXO7Q9Y3I1 522 aa21.12■□□□□ 0.97
SPTSSA-201ENST00000298130 KLF2Q9Y5W3 355 aaPredicted RBP21.12■□□□□ 0.97
SPTSSA-201ENST00000298130 DOCK7Q96N67 2140 aa21.11■□□□□ 0.97
SPTSSA-201ENST00000298130 AADACP22760 399 aa21.11■□□□□ 0.97
SPTSSA-201ENST00000298130 CLINT1Q14677 625 aa21.11■□□□□ 0.97
SPTSSA-201ENST00000298130 ABHD3Q8WU67 409 aa21.11■□□□□ 0.97
SPTSSA-201ENST00000298130 HS3ST6Q96QI5 342 aa21.11■□□□□ 0.97
SPTSSA-201ENST00000298130 M0R036 132 aa21.11■□□□□ 0.97
SPTSSA-201ENST00000298130 CAMLGP49069 296 aa21.11■□□□□ 0.97
SPTSSA-201ENST00000298130 ARL6IP1Q15041 203 aa21.11■□□□□ 0.97
SPTSSA-201ENST00000298130 NSUN5P2Q63ZY6 315 aa21.11■□□□□ 0.97
SPTSSA-201ENST00000298130 SPSB1Q96BD6 273 aa21.11■□□□□ 0.97
SPTSSA-201ENST00000298130 BIN3Q9NQY0 253 aa21.11■□□□□ 0.97
SPTSSA-201ENST00000298130 LOC102723996A0A087X1L8 192 aa21.1■□□□□ 0.97
SPTSSA-201ENST00000298130 ONECUT2O95948 504 aa21.1■□□□□ 0.97
SPTSSA-201ENST00000298130 FKBP2P26885 142 aaKnown RBP21.1■□□□□ 0.97
SPTSSA-201ENST00000298130 CNN3Q15417 329 aaKnown RBP21.1■□□□□ 0.97
SPTSSA-201ENST00000298130 MAGT1Q9H0U3 335 aa21.1■□□□□ 0.97
SPTSSA-201ENST00000298130 SPACA1Q9HBV2 294 aa21.1■□□□□ 0.97
SPTSSA-201ENST00000298130 ITGA3P26006 1051 aa21.1■□□□□ 0.97
SPTSSA-201ENST00000298130 OTX2P32243 289 aa21.1■□□□□ 0.97
SPTSSA-201ENST00000298130 HOXA1P49639 335 aaPredicted RBP21.1■□□□□ 0.97
SPTSSA-201ENST00000298130 FAM3AP98173 230 aa21.1■□□□□ 0.97
SPTSSA-201ENST00000298130 SLC25A26Q70HW3 274 aa21.1■□□□□ 0.97
SPTSSA-201ENST00000298130 SKA3Q8IX90 412 aa21.1■□□□□ 0.97
SPTSSA-201ENST00000298130 GPR137CQ8N3F9 429 aa21.1■□□□□ 0.97
SPTSSA-201ENST00000298130 SLC35G3Q8N808 338 aa21.1■□□□□ 0.97
SPTSSA-201ENST00000298130 CRIM1Q9NZV1 1036 aa21.1■□□□□ 0.97
SPTSSA-201ENST00000298130 E5RGE8 158 aa21.09■□□□□ 0.97
SPTSSA-201ENST00000298130 APOC1P02654 83 aa21.09■□□□□ 0.97
SPTSSA-201ENST00000298130 DECR2Q9NUI1 292 aa21.09■□□□□ 0.97
SPTSSA-201ENST00000298130 NSG2Q9Y328 171 aa21.09■□□□□ 0.97
SPTSSA-201ENST00000298130 NCKAP5O14513 1909 aa21.09■□□□□ 0.97
SPTSSA-201ENST00000298130 CBR3O75828 277 aa21.09■□□□□ 0.97
SPTSSA-201ENST00000298130 HABP2Q14520 560 aaPredicted RBP21.09■□□□□ 0.97
SPTSSA-201ENST00000298130 AWAT1Q58HT5 328 aa21.09■□□□□ 0.97
SPTSSA-201ENST00000298130 KRBOX4Q5JUW0 171 aa21.09■□□□□ 0.97
SPTSSA-201ENST00000298130 TMEM182Q6ZP80 229 aaPredicted RBP21.09■□□□□ 0.97
SPTSSA-201ENST00000298130 AGBL5Q8NDL9 886 aa21.09■□□□□ 0.97
SPTSSA-201ENST00000298130 MSI2Q96DH6 328 aaKnown RBP21.09■□□□□ 0.97
SPTSSA-201ENST00000298130 ABHD14AQ9BUJ0 271 aa21.09■□□□□ 0.97
SPTSSA-201ENST00000298130 WNT5BQ9H1J7 359 aa21.09■□□□□ 0.97
SPTSSA-201ENST00000298130 IL36RNQ9UBH0 155 aa21.09■□□□□ 0.97
SPTSSA-201ENST00000298130 EDARQ9UNE0 448 aa21.09■□□□□ 0.97
SPTSSA-201ENST00000298130 FGF5P12034 268 aa21.08■□□□□ 0.97
SPTSSA-201ENST00000298130 DUSP1P28562 367 aa21.08■□□□□ 0.97
SPTSSA-201ENST00000298130 B3GALT5-AS1P59052 145 aa21.08■□□□□ 0.97
SPTSSA-201ENST00000298130 GUK1Q16774 197 aa21.08■□□□□ 0.97
SPTSSA-201ENST00000298130 LIAT1Q6ZQX7 453 aa21.08■□□□□ 0.97
SPTSSA-201ENST00000298130 UBAC2Q8NBM4 344 aa21.08■□□□□ 0.97
SPTSSA-201ENST00000298130 FOXB1Q99853 325 aa21.08■□□□□ 0.97
SPTSSA-201ENST00000298130 FAM212BQ9NTI7 297 aaPredicted RBP21.08■□□□□ 0.97
SPTSSA-201ENST00000298130 COA4Q9NYJ1 87 aa21.08■□□□□ 0.97
SPTSSA-201ENST00000298130 A0A096LPE4 126 aa21.08■□□□□ 0.97
SPTSSA-201ENST00000298130 A0A1W2PPZ6 126 aa21.08■□□□□ 0.97
SPTSSA-201ENST00000298130 FAM24AA6NFZ4 105 aa21.08■□□□□ 0.97
SPTSSA-201ENST00000298130 GAPDHP04406 335 aaKnown RBP21.08■□□□□ 0.97
SPTSSA-201ENST00000298130 ARG1P05089 322 aa21.08■□□□□ 0.97
SPTSSA-201ENST00000298130 OR13C7P0DN81 318 aa21.08■□□□□ 0.97
SPTSSA-201ENST00000298130 RTL6Q6ICC9 239 aa21.08■□□□□ 0.97
SPTSSA-201ENST00000298130 MAFAQ8NHW3 353 aaPredicted RBP21.08■□□□□ 0.97
SPTSSA-201ENST00000298130 ZNF700Q9H0M5 742 aa21.08■□□□□ 0.97
SPTSSA-201ENST00000298130 SIT1Q9Y3P8 196 aa21.08■□□□□ 0.97
SPTSSA-201ENST00000298130 A6NLC8 198 aa21.08■□□□□ 0.96
SPTSSA-201ENST00000298130 CA11O75493 328 aa21.08■□□□□ 0.96
SPTSSA-201ENST00000298130 PPP1CCP36873 323 aaKnown RBP21.08■□□□□ 0.96
SPTSSA-201ENST00000298130 SNCAP37840 140 aa21.08■□□□□ 0.96
SPTSSA-201ENST00000298130 CLDN15P56746 228 aa21.08■□□□□ 0.96
SPTSSA-201ENST00000298130 RAC3P60763 192 aa21.08■□□□□ 0.96
SPTSSA-201ENST00000298130 PPA1Q15181 289 aa21.08■□□□□ 0.96
SPTSSA-201ENST00000298130 GGNQ86UU5 652 aa21.08■□□□□ 0.96
SPTSSA-201ENST00000298130 OR10D3Q8NH80 312 aa21.08■□□□□ 0.96
SPTSSA-201ENST00000298130 SFT2D1Q8WV19 159 aa21.08■□□□□ 0.96
SPTSSA-201ENST00000298130 ZDBF2Q9HCK1 2354 aa21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 A0A1W2PPE3 182 aa21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 C9J4A7 227 aa21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 MLF1P58340 268 aa21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 SRYQ05066 204 aa21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 SPIN3Q5JUX0 258 aa21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 CD300LFQ8TDQ1 290 aa21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 WDR54Q9H977 334 aa21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 BCO1Q9HAY6 547 aa21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 NKX2-6A6NCS4 301 aa21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 ZNF716A6NP11 495 aa21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 GPR37O15354 613 aa21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 EDN3P14138 238 aa21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 ECI1P42126 302 aa21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 EXT1Q16394 746 aa21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 RBMS3Q6XE24 437 aaKnown RBP21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 Q6ZSR3 168 aa21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 ZNF611Q8N823 705 aa21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 FAM213BQ8TBF2 198 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms