RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 SULF2Q8IWU5 870 aa14.77□□□□□ -0.04
FOXA1-201ENST00000250448 SGPP2Q8IWX5 399 aa14.77□□□□□ -0.04
FOXA1-201ENST00000250448 SEMA6DQ8NFY4 1073 aa14.77□□□□□ -0.04
FOXA1-201ENST00000250448 SIGLEC12Q96PQ1 595 aa14.77□□□□□ -0.04
FOXA1-201ENST00000250448 DKKL1Q9UK85 242 aa14.77□□□□□ -0.04
FOXA1-201ENST00000250448 CDRT15L2A8MXV6 281 aa14.77□□□□□ -0.05
FOXA1-201ENST00000250448 UBE2CO00762 179 aa14.77□□□□□ -0.05
FOXA1-201ENST00000250448 THBS4P35443 961 aa14.77□□□□□ -0.05
FOXA1-201ENST00000250448 GRB2P62993 217 aaKnown RBP14.77□□□□□ -0.05
FOXA1-201ENST00000250448 RNF212Q495C1 297 aa14.77□□□□□ -0.05
FOXA1-201ENST00000250448 GGNBP1Q5YKI7 109 aa14.77□□□□□ -0.05
FOXA1-201ENST00000250448 RBMS3Q6XE24 437 aaKnown RBP14.77□□□□□ -0.05
FOXA1-201ENST00000250448 SLC16A13Q7RTY0 426 aa14.77□□□□□ -0.05
FOXA1-201ENST00000250448 YRDCQ86U90 279 aaKnown RBP14.77□□□□□ -0.05
FOXA1-201ENST00000250448 DTX1Q86Y01 620 aa14.77□□□□□ -0.05
FOXA1-201ENST00000250448 STX12Q86Y82 276 aa14.77□□□□□ -0.05
FOXA1-201ENST00000250448 MRPL24Q96A35 216 aaKnown RBP14.77□□□□□ -0.05
FOXA1-201ENST00000250448 ZNF2Q9BSG1 426 aaPredicted RBP14.77□□□□□ -0.05
FOXA1-201ENST00000250448 LRFN1Q9P244 771 aa14.77□□□□□ -0.05
FOXA1-201ENST00000250448 C5orf63A6NC05 138 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 ARGFXA6NJG6 315 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 E9PLN8 166 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 SGCEO43556 437 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 RAMP1O60894 148 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 TSPAN15O95858 294 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 IFNA21P01568 189 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 CTSDP07339 412 aaPredicted RBP14.76□□□□□ -0.05
FOXA1-201ENST00000250448 CBR1P16152 277 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 EIF2S3LQ2VIR3 472 aaKnown RBP14.76□□□□□ -0.05
FOXA1-201ENST00000250448 AWAT1Q58HT5 328 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 UBAC2Q8NBM4 344 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 PGAM5Q96HS1 289 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 NAA11Q9BSU3 229 aaPredicted RBP14.76□□□□□ -0.05
FOXA1-201ENST00000250448 TM2D1Q9BX74 207 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 PARP12Q9H0J9 701 aaKnown RBP14.76□□□□□ -0.05
FOXA1-201ENST00000250448 STARD10Q9Y365 291 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 MGAQ8IWI9 3026 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 NKX2-8O15522 239 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 ZIC3O60481 467 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 MT-ND4LP03901 98 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 ZNF44P15621 663 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 ARL6IP1Q15041 203 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 KCNMB1Q16558 191 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 SLC25A53Q5H9E4 307 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 OR6X1Q8NH79 312 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 LYZL4Q96KX0 146 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 FAM212BQ9NTI7 297 aaPredicted RBP14.76□□□□□ -0.05
FOXA1-201ENST00000250448 DLL3Q9NYJ7 618 aa14.76□□□□□ -0.05
FOXA1-201ENST00000250448 CRYM-AS1A6NIL9 109 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 TM4SF5O14894 197 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 RRP8O43159 456 aaKnown RBP14.75□□□□□ -0.05
FOXA1-201ENST00000250448 CA11O75493 328 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 SCGB1D2O95969 90 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 S100A9P06702 114 aaKnown RBP14.75□□□□□ -0.05
FOXA1-201ENST00000250448 QDPRP09417 244 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 WT1P19544 449 aaPredicted RBP14.75□□□□□ -0.05
FOXA1-201ENST00000250448 TSC22D1Q15714 1073 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 MIDNQ504T8 468 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 ABHD17BQ5VST6 288 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 ERGIC1Q969X5 290 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 SGCZQ96LD1 299 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 PLEKHA2Q9HB19 425 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 MCTS1Q9ULC4 181 aaKnown RBP14.75□□□□□ -0.05
FOXA1-201ENST00000250448 A0A1B0GWJ7 208 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 CLN5O75503 358 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 SNRNP70P08621 437 aaKnown RBP14.75□□□□□ -0.05
FOXA1-201ENST00000250448 SNCAP37840 140 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 PPA1Q15181 289 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 COMMD1Q8N668 190 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 KDF1Q8NAX2 398 aaPredicted RBP14.75□□□□□ -0.05
FOXA1-201ENST00000250448 RGCCQ9H4X1 137 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 PPP1R14DQ9NXH3 145 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 IGHV3-15A0A0B4J1V0 119 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 DHRS7CA6NNS2 312 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 NME2P1O60361 137 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 AGAP20933 346 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 RTL6Q6ICC9 239 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 ZNF561Q8N587 486 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 SLC25A43Q8WUT9 341 aaPredicted RBP14.75□□□□□ -0.05
FOXA1-201ENST00000250448 TMEM68Q96MH6 324 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 ZNF251Q9BRH9 671 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 ARV1Q9H2C2 271 aa14.75□□□□□ -0.05
FOXA1-201ENST00000250448 ELL3Q9HB65 397 aaPredicted RBP14.75□□□□□ -0.05
FOXA1-201ENST00000250448 TMEM238LA0A1B0GVL6 79 aa14.74□□□□□ -0.05
FOXA1-201ENST00000250448 C7orf77A4D0Y5 90 aa14.74□□□□□ -0.05
FOXA1-201ENST00000250448 A6NLC8 198 aa14.74□□□□□ -0.05
FOXA1-201ENST00000250448 IGLV3-1P01715 115 aa14.74□□□□□ -0.05
FOXA1-201ENST00000250448 S100A13Q99584 98 aa14.74□□□□□ -0.05
FOXA1-201ENST00000250448 CRLF2Q9HC73 371 aa14.74□□□□□ -0.05
FOXA1-201ENST00000250448 ARID1AO14497 2285 aa14.74□□□□□ -0.05
FOXA1-201ENST00000250448 CEP295Q9C0D2 2601 aa14.74□□□□□ -0.05
FOXA1-201ENST00000250448 LRRC3CA6NJW4 275 aa14.74□□□□□ -0.05
FOXA1-201ENST00000250448 TRAPPC6AO75865 159 aa14.74□□□□□ -0.05
FOXA1-201ENST00000250448 FCGR2AP12318 317 aa14.74□□□□□ -0.05
FOXA1-201ENST00000250448 CEACAM1P13688 526 aa14.74□□□□□ -0.05
FOXA1-201ENST00000250448 GUK1Q16774 197 aa14.74□□□□□ -0.05
FOXA1-201ENST00000250448 CYB5R2Q6BCY4 276 aa14.74□□□□□ -0.05
FOXA1-201ENST00000250448 SLC16A14Q7RTX9 510 aa14.74□□□□□ -0.05
FOXA1-201ENST00000250448 C6orf201Q7Z4U5 140 aa14.74□□□□□ -0.05
FOXA1-201ENST00000250448 TRBV23-1A0A0A0MS06 115 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms