RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 ZNF345Q14585 488 aa19.63■□□□□ 0.73
HOXD9-201ENST00000249499 GSG1LQ6UXU4 331 aa19.63■□□□□ 0.73
HOXD9-201ENST00000249499 Q6ZS49 121 aa19.63■□□□□ 0.73
HOXD9-201ENST00000249499 ZNF2Q9BSG1 426 aaPredicted RBP19.63■□□□□ 0.73
HOXD9-201ENST00000249499 NMES1Q9C002 83 aa19.63■□□□□ 0.73
HOXD9-201ENST00000249499 MFFQ9GZY8 342 aa19.63■□□□□ 0.73
HOXD9-201ENST00000249499 CRIM1Q9NZV1 1036 aa19.63■□□□□ 0.73
HOXD9-201ENST00000249499 TRAPPC2LH3BP13 241 aa19.62■□□□□ 0.73
HOXD9-201ENST00000249499 BCL3P20749 454 aa19.62■□□□□ 0.73
HOXD9-201ENST00000249499 SUPT4H1P63272 117 aaKnown RBP19.62■□□□□ 0.73
HOXD9-201ENST00000249499 DAZAP2Q15038 168 aaPredicted RBP19.62■□□□□ 0.73
HOXD9-201ENST00000249499 PLEKHN1Q494U1 663 aaPredicted RBP19.62■□□□□ 0.73
HOXD9-201ENST00000249499 ACSF3Q4G176 576 aaPredicted RBP19.62■□□□□ 0.73
HOXD9-201ENST00000249499 KCTD9Q7L273 389 aa19.62■□□□□ 0.73
HOXD9-201ENST00000249499 GCNT2Q8N0V5 402 aa19.62■□□□□ 0.73
HOXD9-201ENST00000249499 ARL6Q9H0F7 186 aa19.62■□□□□ 0.73
HOXD9-201ENST00000249499 CDH20Q9HBT6 801 aa19.62■□□□□ 0.73
HOXD9-201ENST00000249499 ZNF581Q9P0T4 197 aa19.62■□□□□ 0.73
HOXD9-201ENST00000249499 RCC2Q9P258 522 aaKnown RBP19.62■□□□□ 0.73
HOXD9-201ENST00000249499 WASF3Q9UPY6 502 aa19.62■□□□□ 0.73
HOXD9-201ENST00000249499 OR7C1O76099 320 aaPredicted RBP19.62■□□□□ 0.73
HOXD9-201ENST00000249499 PGAM2P15259 253 aa19.62■□□□□ 0.73
HOXD9-201ENST00000249499 RPS2P15880 293 aaKnown RBP19.62■□□□□ 0.73
HOXD9-201ENST00000249499 SPINK2P20155 84 aa19.62■□□□□ 0.73
HOXD9-201ENST00000249499 FOXC1Q12948 553 aa19.62■□□□□ 0.73
HOXD9-201ENST00000249499 ZNF546Q86UE3 836 aa19.62■□□□□ 0.73
HOXD9-201ENST00000249499 C9orf106Q8NAJ2 232 aa19.62■□□□□ 0.73
HOXD9-201ENST00000249499 NAXEQ8NCW5 288 aa19.62■□□□□ 0.73
HOXD9-201ENST00000249499 PPP1R1CQ8WVI7 109 aa19.62■□□□□ 0.73
HOXD9-201ENST00000249499 SLAMF9Q96A28 289 aa19.62■□□□□ 0.73
HOXD9-201ENST00000249499 CCSO14618 274 aa19.61■□□□□ 0.73
HOXD9-201ENST00000249499 SMPD2O60906 423 aa19.61■□□□□ 0.73
HOXD9-201ENST00000249499 OR2F2O95006 317 aa19.61■□□□□ 0.73
HOXD9-201ENST00000249499 RAB14P61106 215 aa19.61■□□□□ 0.73
HOXD9-201ENST00000249499 IL24Q13007 206 aa19.61■□□□□ 0.73
HOXD9-201ENST00000249499 OR2F1Q13607 317 aa19.61■□□□□ 0.73
HOXD9-201ENST00000249499 TAAR6Q96RI8 345 aa19.61■□□□□ 0.73
HOXD9-201ENST00000249499 ZNF442Q9H7R0 627 aa19.61■□□□□ 0.73
HOXD9-201ENST00000249499 SPACA1Q9HBV2 294 aa19.61■□□□□ 0.73
HOXD9-201ENST00000249499 PLSCR4Q9NRQ2 329 aa19.61■□□□□ 0.73
HOXD9-201ENST00000249499 MTCH1Q9NZJ7 389 aa19.61■□□□□ 0.73
HOXD9-201ENST00000249499 CBR1P16152 277 aa19.6■□□□□ 0.73
HOXD9-201ENST00000249499 Q6ZS92 163 aa19.6■□□□□ 0.73
HOXD9-201ENST00000249499 C17orf78Q8N4C9 275 aa19.6■□□□□ 0.73
HOXD9-201ENST00000249499 ZNF629Q9UEG4 869 aaPredicted RBP19.6■□□□□ 0.73
HOXD9-201ENST00000249499 TNFSF18Q9UNG2 199 aa19.6■□□□□ 0.73
HOXD9-201ENST00000249499 AUP1Q9Y679 476 aa19.6■□□□□ 0.73
HOXD9-201ENST00000249499 B3GALNT1O75752 331 aa19.6■□□□□ 0.73
HOXD9-201ENST00000249499 CFDP00746 253 aaPredicted RBP19.6■□□□□ 0.73
HOXD9-201ENST00000249499 TUBG1P23258 451 aa19.6■□□□□ 0.73
HOXD9-201ENST00000249499 GLRA1P23415 457 aa19.6■□□□□ 0.73
HOXD9-201ENST00000249499 HOXC12P31275 282 aa19.6■□□□□ 0.73
HOXD9-201ENST00000249499 OPRM1P35372 400 aa19.6■□□□□ 0.73
HOXD9-201ENST00000249499 BAMBIQ13145 260 aa19.6■□□□□ 0.73
HOXD9-201ENST00000249499 CNEP1R1Q8N9A8 125 aa19.6■□□□□ 0.73
HOXD9-201ENST00000249499 OR5M9Q8NGP3 310 aa19.6■□□□□ 0.73
HOXD9-201ENST00000249499 GTF3AQ92664 365 aaKnown RBP19.6■□□□□ 0.73
HOXD9-201ENST00000249499 GSX2Q9BZM3 304 aa19.6■□□□□ 0.73
HOXD9-201ENST00000249499 OBP2BQ9NPH6 170 aa19.6■□□□□ 0.73
HOXD9-201ENST00000249499 TUBG2Q9NRH3 451 aa19.6■□□□□ 0.73
HOXD9-201ENST00000249499 MED12LQ86YW9 2145 aa19.6■□□□□ 0.73
HOXD9-201ENST00000249499 LYZL6O75951 148 aa19.59■□□□□ 0.73
HOXD9-201ENST00000249499 GLAP06280 429 aa19.59■□□□□ 0.73
HOXD9-201ENST00000249499 RAC2P15153 192 aa19.59■□□□□ 0.73
HOXD9-201ENST00000249499 SELEP16581 610 aa19.59■□□□□ 0.73
HOXD9-201ENST00000249499 SERPINF1P36955 418 aa19.59■□□□□ 0.73
HOXD9-201ENST00000249499 PPP1CBP62140 327 aa19.59■□□□□ 0.73
HOXD9-201ENST00000249499 IL13RA2Q14627 380 aa19.59■□□□□ 0.73
HOXD9-201ENST00000249499 THAP6Q8TBB0 222 aa19.59■□□□□ 0.73
HOXD9-201ENST00000249499 SEC22AQ96IW7 307 aa19.59■□□□□ 0.73
HOXD9-201ENST00000249499 RPS10-NUDT3A0A1W2PQS6 291 aa19.58■□□□□ 0.73
HOXD9-201ENST00000249499 C5orf51A6NDU8 294 aa19.58■□□□□ 0.73
HOXD9-201ENST00000249499 FAM25EA8MYX2 175 aa19.58■□□□□ 0.73
HOXD9-201ENST00000249499 CRHP06850 196 aa19.58■□□□□ 0.73
HOXD9-201ENST00000249499 CALCRP30988 508 aa19.58■□□□□ 0.73
HOXD9-201ENST00000249499 UCP3P55916 312 aa19.58■□□□□ 0.73
HOXD9-201ENST00000249499 OR2T2Q6IF00 324 aa19.58■□□□□ 0.73
HOXD9-201ENST00000249499 SLC51BQ86UW2 128 aa19.58■□□□□ 0.73
HOXD9-201ENST00000249499 SGPP2Q8IWX5 399 aa19.58■□□□□ 0.73
HOXD9-201ENST00000249499 KCNRGQ8N5I3 272 aa19.58■□□□□ 0.73
HOXD9-201ENST00000249499 EXTL1Q92935 676 aa19.58■□□□□ 0.73
HOXD9-201ENST00000249499 CHD8Q9HCK8 2581 aa19.58■□□□□ 0.73
HOXD9-201ENST00000249499 MBD3L4A6NDZ8 208 aaPredicted RBP19.58■□□□□ 0.72
HOXD9-201ENST00000249499 MBD3L3A6NE82 208 aaPredicted RBP19.58■□□□□ 0.72
HOXD9-201ENST00000249499 MBD3L5A6NJ08 208 aaPredicted RBP19.58■□□□□ 0.72
HOXD9-201ENST00000249499 ZNHIT1O43257 154 aa19.58■□□□□ 0.72
HOXD9-201ENST00000249499 WISP2O76076 250 aa19.58■□□□□ 0.72
HOXD9-201ENST00000249499 IFNA2P01563 188 aa19.58■□□□□ 0.72
HOXD9-201ENST00000249499 IGKV3-15P01624 115 aa19.58■□□□□ 0.72
HOXD9-201ENST00000249499 PI3P19957 117 aa19.58■□□□□ 0.72
HOXD9-201ENST00000249499 IDH3GP51553 393 aaPredicted RBP19.58■□□□□ 0.72
HOXD9-201ENST00000249499 SLC9A3R2Q15599 337 aa19.58■□□□□ 0.72
HOXD9-201ENST00000249499 EIF2S3LQ2VIR3 472 aaKnown RBP19.58■□□□□ 0.72
HOXD9-201ENST00000249499 SLC22A25Q6T423 547 aa19.58■□□□□ 0.72
HOXD9-201ENST00000249499 UNQ6126/PRO20091Q6UXV3 157 aa19.58■□□□□ 0.72
HOXD9-201ENST00000249499 BHLHE23Q8NDY6 225 aa19.58■□□□□ 0.72
HOXD9-201ENST00000249499 MBD3L2Q8NHZ7 208 aaPredicted RBP19.58■□□□□ 0.72
HOXD9-201ENST00000249499 PIK3IP1Q96FE7 263 aa19.58■□□□□ 0.72
HOXD9-201ENST00000249499 MICU1Q9BPX6 476 aa19.58■□□□□ 0.72
HOXD9-201ENST00000249499 RTL8AQ9BWD3 113 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms