RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 GABRA2P47869 451 aa22.78■■□□□ 1.24
CHMP4B-201ENST00000217402 RBM11P57052 281 aaKnown RBP22.78■■□□□ 1.24
CHMP4B-201ENST00000217402 PDCD1Q15116 288 aa22.78■■□□□ 1.24
CHMP4B-201ENST00000217402 SHEQ5VZ18 495 aa22.78■■□□□ 1.24
CHMP4B-201ENST00000217402 OR2W3Q7Z3T1 314 aa22.78■■□□□ 1.24
CHMP4B-201ENST00000217402 ANGPTL6Q8NI99 470 aa22.78■■□□□ 1.24
CHMP4B-201ENST00000217402 CAPZA1P52907 286 aa22.77■■□□□ 1.24
CHMP4B-201ENST00000217402 KCNJ8Q15842 424 aa22.77■■□□□ 1.24
CHMP4B-201ENST00000217402 SPIN3Q5JUX0 258 aa22.77■■□□□ 1.24
CHMP4B-201ENST00000217402 OR51T1Q8NGJ9 327 aa22.77■■□□□ 1.24
CHMP4B-201ENST00000217402 OR5H6Q8NGV6 325 aa22.77■■□□□ 1.24
CHMP4B-201ENST00000217402 CCL13Q99616 98 aa22.77■■□□□ 1.24
CHMP4B-201ENST00000217402 CCDC59Q9P031 241 aaKnown RBP22.77■■□□□ 1.24
CHMP4B-201ENST00000217402 GEMIN2O14893 280 aaKnown RBP22.76■■□□□ 1.23
CHMP4B-201ENST00000217402 LDLRAD4O15165 306 aa22.76■■□□□ 1.23
CHMP4B-201ENST00000217402 FSTL3O95633 263 aa22.76■■□□□ 1.23
CHMP4B-201ENST00000217402 HAND1O96004 215 aa22.76■■□□□ 1.23
CHMP4B-201ENST00000217402 EFNB2P52799 333 aa22.76■■□□□ 1.23
CHMP4B-201ENST00000217402 SCN1BQ07699 218 aa22.76■■□□□ 1.23
CHMP4B-201ENST00000217402 TMEM155Q4W5P6 130 aa22.76■■□□□ 1.23
CHMP4B-201ENST00000217402 LYPD2Q6UXB3 125 aa22.76■■□□□ 1.23
CHMP4B-201ENST00000217402 CD177Q8N6Q3 437 aa22.76■■□□□ 1.23
CHMP4B-201ENST00000217402 WFDC11Q8NEX6 87 aa22.76■■□□□ 1.23
CHMP4B-201ENST00000217402 MRPS24Q96EL2 167 aaKnown RBP22.76■■□□□ 1.23
CHMP4B-201ENST00000217402 ZNF222Q9UK12 451 aa22.76■■□□□ 1.23
CHMP4B-201ENST00000217402 VPS13CQ709C8 3753 aa22.76■■□□□ 1.23
CHMP4B-201ENST00000217402 A0A1B0GW55 424 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 CEACAM18A8MTB9 384 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 DUX4L2P0CJ85 424 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 DUX4L3P0CJ86 424 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 DUX4L4P0CJ87 422 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 DUX4L5P0CJ88 424 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 DUX4L6P0CJ89 424 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 DUX4L7P0CJ90 424 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 PRDX2P32119 198 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 IKZF1Q13422 519 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 ZNF146Q15072 292 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 TAF9Q16594 264 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 DUX4L9Q6RFH8 374 aaPredicted RBP22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 DCDC5Q6ZRR9 648 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 SPICQ8N5J4 248 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 Q96M66 194 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 ZNF581Q9P0T4 197 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 ABRACLQ9P1F3 81 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 DUX4Q9UBX2 424 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 METRNQ9UJH8 293 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 TMPRSS2O15393 492 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 ADAM20O43506 726 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 SLC25A16P16260 332 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 AMY2BP19961 511 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 GABRR1P24046 479 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 RPS27AP62979 156 aaKnown RBP22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 NHLRC3Q5JS37 347 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 FAM216BQ8N7L0 139 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 AP3S1Q92572 193 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 KCTD12Q96CX2 325 aaKnown RBP22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 NICN1Q9BSH3 213 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 FBLN5Q9UBX5 448 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 PCDHB10Q9UN67 800 aa22.75■■□□□ 1.23
CHMP4B-201ENST00000217402 IGHV4-61A0A0C4DH41 118 aa22.74■■□□□ 1.23
CHMP4B-201ENST00000217402 NKX6-3A6NJ46 265 aa22.74■■□□□ 1.23
CHMP4B-201ENST00000217402 TMEM127O75204 238 aa22.74■■□□□ 1.23
CHMP4B-201ENST00000217402 ZNF44P15621 663 aa22.74■■□□□ 1.23
CHMP4B-201ENST00000217402 IL13RA2Q14627 380 aa22.74■■□□□ 1.23
CHMP4B-201ENST00000217402 GAFA1Q96PS6 74 aa22.74■■□□□ 1.23
CHMP4B-201ENST00000217402 MRI1Q9BV20 369 aa22.74■■□□□ 1.23
CHMP4B-201ENST00000217402 COMMD3Q9UBI1 195 aa22.74■■□□□ 1.23
CHMP4B-201ENST00000217402 GLS2Q9UI32 602 aa22.74■■□□□ 1.23
CHMP4B-201ENST00000217402 RAB22AQ9UL26 194 aa22.74■■□□□ 1.23
CHMP4B-201ENST00000217402 MAP1AP78559 2803 aaPredicted RBP22.74■■□□□ 1.23
CHMP4B-201ENST00000217402 PRRC2AP48634 2157 aaKnown RBP22.73■■□□□ 1.23
CHMP4B-201ENST00000217402 SIRPB1O00241 398 aa22.73■■□□□ 1.23
CHMP4B-201ENST00000217402 SH2D1BO14796 132 aa22.73■■□□□ 1.23
CHMP4B-201ENST00000217402 OR7C1O76099 320 aaPredicted RBP22.73■■□□□ 1.23
CHMP4B-201ENST00000217402 RPS2P15880 293 aaKnown RBP22.73■■□□□ 1.23
CHMP4B-201ENST00000217402 CLDND2Q8NHS1 167 aa22.73■■□□□ 1.23
CHMP4B-201ENST00000217402 LPAR5Q9H1C0 372 aa22.73■■□□□ 1.23
CHMP4B-201ENST00000217402 ETV7Q9Y603 341 aa22.73■■□□□ 1.23
CHMP4B-201ENST00000217402 TNFRSF13BO14836 293 aaPredicted RBP22.72■■□□□ 1.23
CHMP4B-201ENST00000217402 NDUFA2O43678 99 aa22.72■■□□□ 1.23
CHMP4B-201ENST00000217402 OR2H2O95918 312 aa22.72■■□□□ 1.23
CHMP4B-201ENST00000217402 SELLP14151 372 aa22.72■■□□□ 1.23
CHMP4B-201ENST00000217402 SCAND1P57086 179 aa22.72■■□□□ 1.23
CHMP4B-201ENST00000217402 COL10A1Q03692 680 aa22.72■■□□□ 1.23
CHMP4B-201ENST00000217402 URM1Q9BTM9 101 aaKnown RBP22.72■■□□□ 1.23
CHMP4B-201ENST00000217402 ZNF665Q9H7R5 613 aa22.72■■□□□ 1.23
CHMP4B-201ENST00000217402 CTSZQ9UBR2 303 aa22.72■■□□□ 1.23
CHMP4B-201ENST00000217402 SPATA2Q9UM82 520 aa22.72■■□□□ 1.23
CHMP4B-201ENST00000217402 CYSRT1A8MQ03 144 aa22.71■■□□□ 1.23
CHMP4B-201ENST00000217402 DEGS1O15121 323 aa22.71■■□□□ 1.23
CHMP4B-201ENST00000217402 RAB6AP20340 208 aa22.71■■□□□ 1.23
CHMP4B-201ENST00000217402 Q6P435 159 aa22.71■■□□□ 1.23
CHMP4B-201ENST00000217402 ZNF788Q6ZQV5 615 aa22.71■■□□□ 1.23
CHMP4B-201ENST00000217402 SAMD12Q8N8I0 201 aa22.71■■□□□ 1.23
CHMP4B-201ENST00000217402 ASCC1Q8N9N2 400 aaKnown RBP22.71■■□□□ 1.23
CHMP4B-201ENST00000217402 ZNRF1Q8ND25 227 aa22.71■■□□□ 1.23
CHMP4B-201ENST00000217402 ACOT12Q8WYK0 555 aa22.71■■□□□ 1.23
CHMP4B-201ENST00000217402 SLIRPQ9GZT3 109 aaKnown RBP22.71■■□□□ 1.23
CHMP4B-201ENST00000217402 A0A0A6YYD4 124 aa22.71■■□□□ 1.23
CHMP4B-201ENST00000217402 RNF223E7ERA6 249 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms