RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Cx3cr1Q9Z0D9 354 aa9.6□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Actl6aQ9Z2N8 429 aaKnown RBP9.6□□□□□ -0.87
Rnf40-201ENSMUST00000033088 PrnA0A075B668 197 aa9.6□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Fcrl6A1YIY0 268 aa9.6□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Vmn1r124D3YTX4 307 aa9.6□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Vmn1r88E9Q235 316 aa9.6□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Cyp1a2P00186 513 aa9.6□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Myf5P24699 255 aa9.6□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Pax2P32114 414 aa9.6□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Efnb2P52800 336 aa9.6□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Crabp1P62965 137 aa9.6□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Gm2016Q3TQZ4 144 aa9.6□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Olfr429Q7TRW1 312 aa9.6□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Wfdc21Q8BTE6 63 aa9.6□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Muc20Q8BUE7 656 aa9.6□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Vmn1r212Q8R268 357 aa9.6□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Phospho2Q9D9M5 241 aa9.6□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Zfand6Q9DCH6 223 aa9.6□□□□□ -0.87
Rnf40-201ENSMUST00000033088 MvkQ9R008 395 aa9.6□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Syt7Q9R0N7 403 aa9.6□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Olfr1089A0A1L1SRK6 311 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 MiipA2A7Y5 387 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Grem1O70326 184 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 P01800 113 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Igfbp2P47877 305 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 TigitP86176 249 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Olfr1340Q3KPC7 315 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 TifaQ793I8 184 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Olfr1341Q7TQV4 312 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 A930004D18RikQ8C8W7 157 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Osbpl11Q8CI95 751 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Sirt5Q8K2C6 310 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Slc25a28Q8R0Z5 364 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Olfr1044Q8VGR9 314 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Olfr638Q8VH20 321 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Ear6Q923L7 155 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Bbc3Q99ML1 193 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 PecrQ99MZ7 303 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 GhsrQ99P50 364 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Q9CYS6 286 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Tln2Q71LX4 2375 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 4930444P10RikD3YUR1 185 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Gm17728E9Q5K2 132 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Gm43191F6YIH5 235 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Hsd11b1P50172 292 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Defa-rs7P50715 91 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 UbdP63072 162 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Snrnp70Q62376 448 aaKnown RBP9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Pif1Q80SX8 650 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Q8C784 167 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Wdr13Q91V09 485 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Olfr114Q923Q8 312 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Tbl1xQ9QXE7 527 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Atg2aQ6P4T0 1914 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Igkv18-36A0A075B5M9 114 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Gm13420A0A140LJJ2 248 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 BatfO35284 125 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Rab19P35294 217 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Nufip2Q5F2E7 692 aaKnown RBP9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Olfr43Q7TRX1 313 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Olfr403Q7TRX2 313 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Tnfsfm13Q8BXS2 410 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Olfr1163Q8VFR4 316 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Olfr512Q8VFZ4 326 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Olfr676Q8VGZ9 317 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Sfxn1Q99JR1 322 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Ubqln4Q99NB8 596 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Atg12Q9CQY1 141 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Slc25a30Q9CR58 291 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Gng10Q9CXP8 68 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Slc25a22Q9D6M3 323 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Olfr937Q9EQB4 311 aa9.59□□□□□ -0.87
Rnf40-201ENSMUST00000033088 Igkv1-135A0A0B4J1H7 120 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Zfp352A2AML7 551 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Itgb2P11835 771 aaKnown RBP9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Bmi1P25916 324 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Cd55Q61475 390 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Sidt1Q6AXF6 827 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Cpne4Q8BLR2 557 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Fam199xQ8K2D0 388 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Mki67E9PVX6 3177 aaKnown RBP9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Malrd1A2AJX4 2123 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Gm45736A0A1B0GS18 427 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Ube2dnl2A2AFH2 155 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Gm3543D3Z235 184 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Npffr1E9Q468 432 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Gm5218F6YH22 154 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 RbpjlO08674 515 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Tgfbr3O88393 850 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 P01631 113 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Hmgn2P09602 90 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Acyp2P56375 106 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Sirt6P59941 334 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Vash2Q8C5G2 355 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Sertm1Q8CD78 107 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Tmem150bQ8R218 238 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Chrm5Q920H4 532 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Stard4Q99JV5 224 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Cotl1Q9CQI6 142 aa9.58□□□□□ -0.88
Rnf40-201ENSMUST00000033088 Prss22Q9ER10 306 aa9.58□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms