RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 SCRT1Q9BWW7 348 aa12.02□□□□□ -0.48
PHGDH-233ENST00000642021 IGKV1-12A0A0C4DH73 117 aa12.02□□□□□ -0.49
PHGDH-233ENST00000642021 MED19A0JLT2 244 aaPredicted RBP12.02□□□□□ -0.49
PHGDH-233ENST00000642021 NME2P1O60361 137 aa12.02□□□□□ -0.49
PHGDH-233ENST00000642021 C1QL1O75973 258 aa12.02□□□□□ -0.49
PHGDH-233ENST00000642021 ONECUT2O95948 504 aa12.02□□□□□ -0.49
PHGDH-233ENST00000642021 IGKV1D-12P01611 117 aa12.02□□□□□ -0.49
PHGDH-233ENST00000642021 RNF224P0DH78 156 aa12.02□□□□□ -0.49
PHGDH-233ENST00000642021 MEOX2P50222 304 aa12.02□□□□□ -0.49
PHGDH-233ENST00000642021 HABP2Q14520 560 aaPredicted RBP12.02□□□□□ -0.49
PHGDH-233ENST00000642021 SMCO1Q147U7 214 aa12.02□□□□□ -0.49
PHGDH-233ENST00000642021 RSU1Q15404 277 aa12.02□□□□□ -0.49
PHGDH-233ENST00000642021 PIGYQ3MUY2 71 aa12.02□□□□□ -0.49
PHGDH-233ENST00000642021 PHLDA2Q53GA4 152 aa12.02□□□□□ -0.49
PHGDH-233ENST00000642021 UBAC2Q8NBM4 344 aa12.02□□□□□ -0.49
PHGDH-233ENST00000642021 RTN4IP1Q8WWV3 396 aaPredicted RBP12.02□□□□□ -0.49
PHGDH-233ENST00000642021 SRXN1Q9BYN0 137 aa12.02□□□□□ -0.49
PHGDH-233ENST00000642021 ULBP2Q9BZM5 246 aa12.02□□□□□ -0.49
PHGDH-233ENST00000642021 METTL9Q9H1A3 318 aa12.02□□□□□ -0.49
PHGDH-233ENST00000642021 C19orf25Q9UFG5 118 aaPredicted RBP12.02□□□□□ -0.49
PHGDH-233ENST00000642021 ZDHHC8Q9ULC8 765 aa12.02□□□□□ -0.49
PHGDH-233ENST00000642021 TIMM10BQ9Y5J6 103 aa12.02□□□□□ -0.49
PHGDH-233ENST00000642021 CCDC187A0A096LP49 1063 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 A0A1B0GWJ7 208 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 TNFSF11O14788 317 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 GEMIN2O14893 280 aaKnown RBP12.01□□□□□ -0.49
PHGDH-233ENST00000642021 CLN5O75503 358 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 CRYGSP22914 178 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 FKBP2P26885 142 aaKnown RBP12.01□□□□□ -0.49
PHGDH-233ENST00000642021 NOVA1P51513 510 aaKnown RBP12.01□□□□□ -0.49
PHGDH-233ENST00000642021 TGIF1Q15583 401 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 ZNF774Q6NX45 483 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 PLXDC2Q6UX71 529 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.01□□□□□ -0.49
PHGDH-233ENST00000642021 OR52M1Q8NGK5 317 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 SFT2D1Q8WV19 159 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 SLC39A7Q92504 469 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 STARD10Q9Y365 291 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 PQLC2LA1A4F0 135 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 MIDNQ504T8 468 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 FAM27BQ5VT28 67 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 RTL6Q6ICC9 239 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 OPN5Q6U736 354 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 Q6ZPA2 131 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 OR11L1Q8NGX0 322 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 SPTSSAQ969W0 71 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 C14orf79Q96F83 325 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 NAA60Q9H7X0 242 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 ZNF728P0DKX0 622 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 NR2C1P13056 603 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 LIFP15018 202 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 CHATP28329 748 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 ECI1P42126 302 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 SWI5Q1ZZU3 235 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 MAML2Q8IZL2 1156 aaPredicted RBP12.01□□□□□ -0.49
PHGDH-233ENST00000642021 TMEM156Q8N614 296 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 OR10AD1Q8NGE0 317 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 C10orf35Q96D05 121 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 TMEM68Q96MH6 324 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 IP6K3Q96PC2 410 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 NAA11Q9BSU3 229 aaPredicted RBP12.01□□□□□ -0.49
PHGDH-233ENST00000642021 ARV1Q9H2C2 271 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 CELSR3Q9NYQ7 3312 aa12.01□□□□□ -0.49
PHGDH-233ENST00000642021 CCDC85CA6NKD9 419 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 EIF1BO60739 113 aaKnown RBP12□□□□□ -0.49
PHGDH-233ENST00000642021 SNCAP37840 140 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 SNRPEP62304 92 aaKnown RBP12□□□□□ -0.49
PHGDH-233ENST00000642021 NHLH2Q02577 135 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 SKA3Q8IX90 412 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 AKR7LQ8NHP1 331 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 SH3BGRL3Q9H299 93 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 SMCO4Q9NRQ5 59 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 NECAP2Q9NVZ3 263 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 KCNIP3Q9Y2W7 256 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 SGCEO43556 437 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 SYNGR3O43761 229 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 VAMP5O95183 116 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 UMODP07911 640 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 DAOP14920 347 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 ASCL1P50553 236 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 ZNF616Q08AN1 781 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 ZNF468Q5VIY5 522 aaPredicted RBP12□□□□□ -0.49
PHGDH-233ENST00000642021 BATF2Q8N1L9 274 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 OR5L1Q8NGL2 311 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 ANGPTL4Q9BY76 406 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 RNF122Q9H9V4 155 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 PLEKHA2Q9HB19 425 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 RPS10P5Q9NQ39 176 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 SLC2A9Q9NRM0 540 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 HSF4Q9ULV5 492 aa12□□□□□ -0.49
PHGDH-233ENST00000642021 E5RGE8 158 aa11.99□□□□□ -0.49
PHGDH-233ENST00000642021 EIF3GO75821 320 aaKnown RBP eCLIP11.99□□□□□ -0.49
PHGDH-233ENST00000642021 TSPAN15O95858 294 aa11.99□□□□□ -0.49
PHGDH-233ENST00000642021 LCATP04180 440 aa11.99□□□□□ -0.49
PHGDH-233ENST00000642021 DANCRP0C864 163 aa11.99□□□□□ -0.49
PHGDH-233ENST00000642021 MRPS34P82930 218 aaKnown RBP11.99□□□□□ -0.49
PHGDH-233ENST00000642021 ABCA11PQ4W5N1 156 aa11.99□□□□□ -0.49
PHGDH-233ENST00000642021 SLC22A25Q6T423 547 aa11.99□□□□□ -0.49
PHGDH-233ENST00000642021 C5orf24Q7Z6I8 188 aa11.99□□□□□ -0.49
PHGDH-233ENST00000642021 FBXL14Q8N1E6 418 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms