RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 ADI1Q9BV57 179 aa11.29□□□□□ -0.6
LINC00339-211ENST00000641009 CHST5Q9GZS9 411 aa11.29□□□□□ -0.6
LINC00339-211ENST00000641009 LOC107986453A0A1B0GWG9 222 aa11.28□□□□□ -0.6
LINC00339-211ENST00000641009 MEGF11A6BM72 1044 aa11.28□□□□□ -0.6
LINC00339-211ENST00000641009 C17orf98A8MV24 154 aa11.28□□□□□ -0.6
LINC00339-211ENST00000641009 CHST1O43916 411 aa11.28□□□□□ -0.6
LINC00339-211ENST00000641009 ZNF737O75373 536 aa11.28□□□□□ -0.6
LINC00339-211ENST00000641009 GATBO75879 557 aaKnown RBP11.28□□□□□ -0.6
LINC00339-211ENST00000641009 FUT6P51993 359 aa11.28□□□□□ -0.6
LINC00339-211ENST00000641009 EFNB2P52799 333 aa11.28□□□□□ -0.6
LINC00339-211ENST00000641009 EDDM3BP56851 147 aa11.28□□□□□ -0.6
LINC00339-211ENST00000641009 ISL1P61371 349 aa11.28□□□□□ -0.6
LINC00339-211ENST00000641009 AANATQ16613 207 aa11.28□□□□□ -0.6
LINC00339-211ENST00000641009 C2orf68Q2NKX9 166 aa11.28□□□□□ -0.6
LINC00339-211ENST00000641009 PLA1AQ53H76 456 aa11.28□□□□□ -0.6
LINC00339-211ENST00000641009 SLC25A26Q70HW3 274 aa11.28□□□□□ -0.6
LINC00339-211ENST00000641009 DYNAPQ8N1N2 210 aa11.28□□□□□ -0.6
LINC00339-211ENST00000641009 PIFOQ8TCI5 191 aa11.28□□□□□ -0.6
LINC00339-211ENST00000641009 RFKQ969G6 155 aa11.28□□□□□ -0.6
LINC00339-211ENST00000641009 IL36RNQ9UBH0 155 aa11.28□□□□□ -0.6
LINC00339-211ENST00000641009 FOXJ3Q9UPW0 622 aa11.28□□□□□ -0.6
LINC00339-211ENST00000641009 ARG1P05089 322 aa11.27□□□□□ -0.6
LINC00339-211ENST00000641009 CHRM2P08172 466 aa11.27□□□□□ -0.6
LINC00339-211ENST00000641009 UBCP0CG48 685 aaKnown RBP11.27□□□□□ -0.6
LINC00339-211ENST00000641009 KIR2DS4P43632 304 aa11.27□□□□□ -0.6
LINC00339-211ENST00000641009 CDC42P60953 191 aa11.27□□□□□ -0.6
LINC00339-211ENST00000641009 TMED1Q13445 227 aa11.27□□□□□ -0.6
LINC00339-211ENST00000641009 GDPD3Q7L5L3 318 aa11.27□□□□□ -0.6
LINC00339-211ENST00000641009 TCF23Q7RTU1 214 aa11.27□□□□□ -0.6
LINC00339-211ENST00000641009 FAM220AQ7Z4H9 259 aa11.27□□□□□ -0.6
LINC00339-211ENST00000641009 EGFL6Q8IUX8 553 aa11.27□□□□□ -0.6
LINC00339-211ENST00000641009 OR8H2Q8N162 312 aa11.27□□□□□ -0.6
LINC00339-211ENST00000641009 C11orf44Q8N8P7 122 aa11.27□□□□□ -0.6
LINC00339-211ENST00000641009 OR4C13Q8NGP0 309 aa11.27□□□□□ -0.6
LINC00339-211ENST00000641009 PYDC1Q8WXC3 89 aa11.27□□□□□ -0.6
LINC00339-211ENST00000641009 EMG1Q92979 244 aaKnown RBP11.27□□□□□ -0.6
LINC00339-211ENST00000641009 ADAT3Q96EY9 351 aaPredicted RBP11.27□□□□□ -0.6
LINC00339-211ENST00000641009 BORCS8Q96FH0 119 aa11.27□□□□□ -0.6
LINC00339-211ENST00000641009 TMEM82A0PJX8 343 aa11.26□□□□□ -0.61
LINC00339-211ENST00000641009 FAM90A8PA6NJQ4 464 aa11.26□□□□□ -0.61
LINC00339-211ENST00000641009 CIB2O75838 187 aa11.26□□□□□ -0.61
LINC00339-211ENST00000641009 SERPINA3P01011 423 aa11.26□□□□□ -0.61
LINC00339-211ENST00000641009 IGHA1P01876 353 aa11.26□□□□□ -0.61
LINC00339-211ENST00000641009 ZNF728P0DKX0 622 aa11.26□□□□□ -0.61
LINC00339-211ENST00000641009 CALCBP10092 127 aa11.26□□□□□ -0.61
LINC00339-211ENST00000641009 NPBWR2P48146 333 aa11.26□□□□□ -0.61
LINC00339-211ENST00000641009 RAB13P51153 203 aa11.26□□□□□ -0.61
LINC00339-211ENST00000641009 GABPB1Q06547 395 aaPredicted RBP11.26□□□□□ -0.61
LINC00339-211ENST00000641009 EDDM3AQ14507 147 aa11.26□□□□□ -0.61
LINC00339-211ENST00000641009 HERPUD1Q15011 391 aa11.26□□□□□ -0.61
LINC00339-211ENST00000641009 LDLRAD2Q5SZI1 272 aa11.26□□□□□ -0.61
LINC00339-211ENST00000641009 C1QL4Q86Z23 238 aa11.26□□□□□ -0.61
LINC00339-211ENST00000641009 TPRX1Q8N7U7 411 aa11.26□□□□□ -0.61
LINC00339-211ENST00000641009 CCDC54Q8NEL0 328 aa11.26□□□□□ -0.61
LINC00339-211ENST00000641009 OR2G2Q8NGZ5 317 aa11.26□□□□□ -0.61
LINC00339-211ENST00000641009 NKX3-1Q99801 234 aaPredicted RBP11.26□□□□□ -0.61
LINC00339-211ENST00000641009 CHST6Q9GZX3 395 aa11.26□□□□□ -0.61
LINC00339-211ENST00000641009 RAB18Q9NP72 206 aa11.26□□□□□ -0.61
LINC00339-211ENST00000641009 RBFOX1Q9NWB1 397 aaKnown RBP11.26□□□□□ -0.61
LINC00339-211ENST00000641009 IMPAD1Q9NX62 359 aa11.26□□□□□ -0.61
LINC00339-211ENST00000641009 IGKV1-9A0A0C4DH69 117 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 ODF3BA8MYP8 253 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 ENTPD6O75354 484 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 HAND1O96004 215 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 ALPLP05186 524 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 CSF1P09603 554 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 IGHV1-8P0DP01 117 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 BCL3P20749 454 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 DUSP1P28562 367 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 POU3F4P49335 361 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 RBP2P50120 134 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 CNN3Q15417 329 aaKnown RBP11.25□□□□□ -0.61
LINC00339-211ENST00000641009 FAM189A2Q15884 450 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 Q6ZTK2 550 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 KLHDC1Q8N7A1 406 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 OR52N4Q8NGI2 321 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 OR13D1Q8NGV5 346 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 OR2T6Q8NHC8 308 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 PP6455Q8WZ26 134 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 FGGYQ96C11 551 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 C10orf35Q96D05 121 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 RNFT2Q96EX2 444 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 SNX22Q96L94 193 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 ZNF714Q96N38 554 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 RANBP3Q9H6Z4 567 aaPredicted RBP11.25□□□□□ -0.61
LINC00339-211ENST00000641009 FRRS1LQ9P0K9 344 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 VGLL3A8MV65 326 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 J3QRE1 110 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 EI24O14681 340 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 PSPNO60542 156 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 RBP4P02753 201 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 GABRR1P24046 479 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 ATP1B3P54709 279 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 SNU13P55769 128 aaKnown RBP11.25□□□□□ -0.61
LINC00339-211ENST00000641009 MTCP1P56278 107 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 OR12D2P58182 307 aa11.25□□□□□ -0.61
LINC00339-211ENST00000641009 NANOS3P60323 173 aaKnown RBP11.25□□□□□ -0.61
LINC00339-211ENST00000641009 MEF2CQ06413 473 aaPredicted RBP11.25□□□□□ -0.61
LINC00339-211ENST00000641009 DYNC1I2Q13409 638 aaKnown RBP11.25□□□□□ -0.61
LINC00339-211ENST00000641009 GRK1Q15835 563 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms