RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 KCNRGQ8N5I3 272 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 MDS2Q8NDY4 140 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 OR1J2Q8NGS2 313 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 FAM3DQ96BQ1 224 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 SPACA5Q96QH8 159 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 ZNF552Q9H707 407 aaPredicted RBP10.05□□□□□ -0.8
CLN6-217ENST00000636964 PLEK2Q9NYT0 353 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 LIPGQ9Y5X9 500 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 DNPH1O43598 174 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 NME2P1O60361 137 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 SNAPC5O75971 98 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 NPSP0C0P6 89 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 LINC00614P0C842 121 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 IGFBP3P17936 291 aaPredicted RBP10.05□□□□□ -0.8
CLN6-217ENST00000636964 NME2P22392 152 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 SERPINF1P36955 418 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 CLDN18P56856 261 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 TAS2R20P59543 309 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 PMP22Q01453 160 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 RAB11BQ15907 218 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 LPCAT3Q6P1A2 487 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 UQCC3Q6UW78 93 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 GPR137CQ8N3F9 429 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 FNDC9Q8TBE3 224 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 TCTEX1D2Q8WW35 142 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 GAL3ST2Q9H3Q3 398 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 GPR84Q9NQS5 396 aa10.05□□□□□ -0.8
CLN6-217ENST00000636964 A0A1B0GTI1 187 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 KLRC4-KLRK1H3BQV0 150 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 ZNHIT1O43257 154 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 SLC34A2O95436 690 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 RLN1P04808 185 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 CSRP1P21291 193 aaKnown RBP10.04□□□□□ -0.8
CLN6-217ENST00000636964 LSM6P62312 80 aaKnown RBP10.04□□□□□ -0.8
CLN6-217ENST00000636964 GUCA2AQ02747 115 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 RNFT1Q5M7Z0 435 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 GLT8D1Q68CQ7 371 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 RNF144BQ7Z419 303 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 FOXRED2Q8IWF2 684 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 GJC3Q8NFK1 279 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 FDCSPQ8NFU4 85 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 OR13C9Q8NGT0 318 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 HAVCR1Q96D42 359 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 GGACTQ9BVM4 153 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 EXO5Q9H790 373 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 ZNF629Q9UEG4 869 aaPredicted RBP10.04□□□□□ -0.8
CLN6-217ENST00000636964 KLF13Q9Y2Y9 288 aaPredicted RBP10.04□□□□□ -0.8
CLN6-217ENST00000636964 SLC17A2O00624 439 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 IFNA2P01563 188 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 LIPCP11150 499 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 PAX6P26367 422 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 AP3S2P59780 193 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 BLOC1S1P78537 153 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 CEACAM16Q2WEN9 425 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 ZNF766Q5HY98 468 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 ABLIM2Q6H8Q1 611 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 RNF122Q9H9V4 155 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 CALHM2Q9HA72 323 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 RYDENQ9NUL5 291 aaKnown RBP10.04□□□□□ -0.8
CLN6-217ENST00000636964 TNFSF18Q9UNG2 199 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 DOCK7Q96N67 2140 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 AKAP13Q12802 2813 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 MEIS3P1A6NDR6 274 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 DLEU1O43261 78 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 CYTIPO60759 359 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 HEXAP06865 529 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 CD82P27701 267 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 HTR2CP28335 458 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 PRSS12P56730 875 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 FABP9Q0Z7S8 132 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 RSPO1Q2MKA7 263 aaPredicted RBP10.04□□□□□ -0.8
CLN6-217ENST00000636964 NCMAPQ5T1S8 102 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 ZNF813Q6ZN06 617 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 TUSC5Q8IXB3 177 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 OR52N4Q8NGI2 321 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 PRRG4Q9BZD6 226 aa10.04□□□□□ -0.8
CLN6-217ENST00000636964 PTPRBP23467 1997 aa10.03□□□□□ -0.8
CLN6-217ENST00000636964 BCL2L11O43521 198 aa10.03□□□□□ -0.8
CLN6-217ENST00000636964 VAMP2P63027 116 aa10.03□□□□□ -0.8
CLN6-217ENST00000636964 OR4D6Q8NGJ1 314 aa10.03□□□□□ -0.8
CLN6-217ENST00000636964 OR51S1Q8NGJ8 323 aa10.03□□□□□ -0.8
CLN6-217ENST00000636964 PGAM5Q96HS1 289 aa10.03□□□□□ -0.8
CLN6-217ENST00000636964 OCSTAMPQ9BR26 566 aa10.03□□□□□ -0.8
CLN6-217ENST00000636964 A0A1W2PPQ1 181 aa10.03□□□□□ -0.8
CLN6-217ENST00000636964 TSTD3H0UI37 97 aa10.03□□□□□ -0.8
CLN6-217ENST00000636964 FGF16O43320 207 aa10.03□□□□□ -0.8
CLN6-217ENST00000636964 ZNF708P17019 499 aa10.03□□□□□ -0.8
CLN6-217ENST00000636964 ZNF133P52736 654 aaPredicted RBP10.03□□□□□ -0.8
CLN6-217ENST00000636964 RRADP55042 308 aa10.03□□□□□ -0.8
CLN6-217ENST00000636964 HGFACQ04756 655 aa10.03□□□□□ -0.8
CLN6-217ENST00000636964 SLC10A1Q14973 349 aa10.03□□□□□ -0.8
CLN6-217ENST00000636964 TSPO2Q5TGU0 170 aa10.03□□□□□ -0.8
CLN6-217ENST00000636964 CDPF1Q6NVV7 123 aa10.03□□□□□ -0.8
CLN6-217ENST00000636964 FGFBP3Q8TAT2 258 aa10.03□□□□□ -0.8
CLN6-217ENST00000636964 RAB40AQ8WXH6 277 aa10.03□□□□□ -0.8
CLN6-217ENST00000636964 DVL3Q92997 716 aaPredicted RBP10.03□□□□□ -0.8
CLN6-217ENST00000636964 ATG5Q9H1Y0 275 aa10.03□□□□□ -0.8
CLN6-217ENST00000636964 ETV7Q9Y603 341 aa10.03□□□□□ -0.8
CLN6-217ENST00000636964 UBE2QL1A1L167 161 aa10.02□□□□□ -0.8
CLN6-217ENST00000636964 MRPL33O75394 65 aaKnown RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms