RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 OR2AT4A6NND4 320 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 F5H0A9 414 aaPredicted RBP13.36□□□□□ -0.27
CLN6-216ENST00000636876 CDRT1O95170 752 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 KNG1P01042 644 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 SFTPBP07988 381 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 PSG2P11465 335 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 RAB3BP20337 219 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 IL2RGP31785 369 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 PSMD7P51665 324 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 RSU1Q15404 277 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 GPR107Q5VW38 600 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 LYPD2Q6UXB3 125 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 TPRA1Q86W33 373 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 ANKRD13BQ86YJ7 626 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 FAM58AQ8N1B3 248 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 OR5T2Q8NGG2 359 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 OR6M1Q8NGM8 313 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 OR10K1Q8NGX5 313 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 ANGPTL6Q8NI99 470 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 RAB39BQ96DA2 213 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 COX4I2Q96KJ9 171 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 S100A13Q99584 98 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 METTL9Q9H1A3 318 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 ZNF665Q9H7R5 613 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 HMG20AQ9NP66 347 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 MIOXQ9UGB7 285 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 V9GY05 133 aa13.36□□□□□ -0.27
CLN6-216ENST00000636876 ABCA2Q9BZC7 2435 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 IGKV1D-17A0A075B6S4 117 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 SLC17A2O00624 439 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 SLC22A1O15245 554 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 ADAM20O43506 726 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 HEXAP06865 529 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 CALCBP10092 127 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 RPS2P15880 293 aaKnown RBP13.35□□□□□ -0.27
CLN6-216ENST00000636876 PRKACAP17612 351 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 SDC2P34741 201 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 BMXP51813 675 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 OR10A3P58181 314 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 LSM3P62310 102 aaKnown RBP13.35□□□□□ -0.27
CLN6-216ENST00000636876 ATPAF1Q5TC12 328 aaPredicted RBP13.35□□□□□ -0.27
CLN6-216ENST00000636876 AWAT2Q6E213 333 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 ELP2Q6IA86 826 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 FAM166AQ6J272 317 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 GLIPR1L1Q6UWM5 242 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 SLC16A12Q6ZSM3 486 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 Q8NFD4 153 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 TBC1D15Q8TC07 691 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 C1orf147Q96MC9 270 aaPredicted RBP13.35□□□□□ -0.27
CLN6-216ENST00000636876 CCL13Q99616 98 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 NAA50Q9GZZ1 169 aaKnown RBP13.35□□□□□ -0.27
CLN6-216ENST00000636876 DNTTIP1Q9H147 329 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 PLGRKTQ9HBL7 147 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 IL36RNQ9UBH0 155 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 ZNF222Q9UK12 451 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 ZNF469Q96JG9 3925 aaPredicted RBP13.35□□□□□ -0.27
CLN6-216ENST00000636876 TLN2Q9Y4G6 2542 aa13.35□□□□□ -0.27
CLN6-216ENST00000636876 CSPG4Q6UVK1 2322 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 MALRD1Q5VYJ5 2156 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 NKX6-3A6NJ46 265 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 RFPL4AA6NLU0 287 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 RFPL4AL1F8VTS6 287 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 SMAD7O15105 426 aaKnown RBP13.34□□□□□ -0.27
CLN6-216ENST00000636876 ZNF780AO75290 641 aaPredicted RBP13.34□□□□□ -0.27
CLN6-216ENST00000636876 GABARAPO95166 117 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 HTR3BO95264 441 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 TFF1P04155 84 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 WNT2P09544 360 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 UBBP0CG47 229 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 AMY2BP19961 511 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 CPT2P23786 658 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 HTR2CP28335 458 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 TGFBR1P36897 503 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 GABRA2P47869 451 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 FGF12P61328 243 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 RAB11BQ15907 218 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 DGUOKQ16854 277 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 SLC22A6Q4U2R8 563 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 FIP1L1Q6UN15 594 aaKnown RBP13.34□□□□□ -0.27
CLN6-216ENST00000636876 ZNF788Q6ZQV5 615 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 NR2C2APQ86WQ0 139 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 OR8B3Q8NGG8 313 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 NEIL1Q96FI4 390 aaPredicted RBP13.34□□□□□ -0.27
CLN6-216ENST00000636876 GAFA1Q96PS6 74 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 OR8B2Q96RD0 313 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 PCDHB16Q9NRJ7 776 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 KAAG1Q9UBP8 84 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 GHRLQ9UBU3 117 aa13.34□□□□□ -0.27
CLN6-216ENST00000636876 ABCA1O95477 2261 aa13.33□□□□□ -0.28
CLN6-216ENST00000636876 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.33□□□□□ -0.28
CLN6-216ENST00000636876 YLPM1P49750 1951 aaKnown RBP13.33□□□□□ -0.28
CLN6-216ENST00000636876 A0A0G2JK05 382 aa13.33□□□□□ -0.28
CLN6-216ENST00000636876 SMIM30A4D0T7 59 aa13.33□□□□□ -0.28
CLN6-216ENST00000636876 CSTBP04080 98 aaKnown RBP13.33□□□□□ -0.28
CLN6-216ENST00000636876 CLEC2LP0C7M8 214 aa13.33□□□□□ -0.28
CLN6-216ENST00000636876 SERPINA2P20848 420 aa13.33□□□□□ -0.28
CLN6-216ENST00000636876 CFPP27918 469 aa13.33□□□□□ -0.28
CLN6-216ENST00000636876 PRDX2P32119 198 aa13.33□□□□□ -0.28
CLN6-216ENST00000636876 SNU13P55769 128 aaKnown RBP13.33□□□□□ -0.28
CLN6-216ENST00000636876 GPR176Q14439 515 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms