RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 NKX3-1Q99801 234 aaPredicted RBP6.98□□□□□ -1.29
SDF2-204ENST00000587338 SSX3Q99909 188 aa6.98□□□□□ -1.29
SDF2-204ENST00000587338 OCSTAMPQ9BR26 566 aa6.98□□□□□ -1.29
SDF2-204ENST00000587338 ADAT1Q9BUB4 502 aaKnown RBP6.98□□□□□ -1.29
SDF2-204ENST00000587338 TMED9Q9BVK6 235 aa6.98□□□□□ -1.29
SDF2-204ENST00000587338 FUNDC2Q9BWH2 189 aa6.98□□□□□ -1.29
SDF2-204ENST00000587338 NPFFR1Q9GZQ6 430 aa6.98□□□□□ -1.29
SDF2-204ENST00000587338 FAM192AQ9GZU8 254 aa6.98□□□□□ -1.29
SDF2-204ENST00000587338 NAA50Q9GZZ1 169 aaKnown RBP6.98□□□□□ -1.29
SDF2-204ENST00000587338 RANBP3Q9H6Z4 567 aaPredicted RBP6.98□□□□□ -1.29
SDF2-204ENST00000587338 BRD7Q9NPI1 651 aa6.98□□□□□ -1.29
SDF2-204ENST00000587338 DUX4Q9UBX2 424 aa6.98□□□□□ -1.29
SDF2-204ENST00000587338 RSL24D1Q9UHA3 163 aaKnown RBP6.98□□□□□ -1.29
SDF2-204ENST00000587338 CYB5R1Q9UHQ9 305 aa6.98□□□□□ -1.29
SDF2-204ENST00000587338 MRM2Q9UI43 246 aaKnown RBP6.98□□□□□ -1.29
SDF2-204ENST00000587338 ATPIF1Q9UII2 106 aa6.98□□□□□ -1.29
SDF2-204ENST00000587338 MAB21L2Q9Y586 359 aa6.98□□□□□ -1.29
SDF2-204ENST00000587338 N6AMT1Q9Y5N5 214 aa6.98□□□□□ -1.29
SDF2-204ENST00000587338 LHFPL6Q9Y693 200 aa6.98□□□□□ -1.29
SDF2-204ENST00000587338 CEPT1Q9Y6K0 416 aa6.98□□□□□ -1.29
SDF2-204ENST00000587338 TRBV2A0A0J9YWF9 115 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 A0A1W2PRX2 142 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 PRR32B1ATL7 298 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 E9PI62 339 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 AIREO43918 545 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 SULT1C4O75897 302 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 GRPP07492 148 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 CPEP16870 476 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 GADD45AP24522 165 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 PSMA1P25786 263 aaKnown RBP6.97□□□□□ -1.29
SDF2-204ENST00000587338 TAS2R43P59537 309 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 DOC2BQ14184 412 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 HABP2Q14520 560 aaPredicted RBP6.97□□□□□ -1.29
SDF2-204ENST00000587338 C11orf91Q3C1V1 193 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 ZNF826PQ6ZT77 177 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 KCTD20Q7Z5Y7 419 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 ZNF679Q8IYX0 411 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 FAM216BQ8N7L0 139 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 BEND2Q8NDZ0 799 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 C17orf50Q8WW18 174 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 DGCR14Q96DF8 476 aaKnown RBP6.97□□□□□ -1.29
SDF2-204ENST00000587338 YIPF6Q96EC8 236 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 PELI1Q96FA3 418 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 MAP6Q96JE9 813 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 CCL13Q99616 98 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 CITED2Q99967 270 aaPredicted RBP6.97□□□□□ -1.29
SDF2-204ENST00000587338 B9D2Q9BPU9 175 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 CHCHD6Q9BRQ6 235 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 HDHD2Q9H0R4 259 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 OR51E2Q9H255 320 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 RAB18Q9NP72 206 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 ISYNA1Q9NPH2 558 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 NOP16Q9Y3C1 178 aaKnown RBP6.97□□□□□ -1.29
SDF2-204ENST00000587338 LRP12Q9Y561 859 aa6.97□□□□□ -1.29
SDF2-204ENST00000587338 ADARB2-AS1A8MUL3 147 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 ZNF878C9JN71 531 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 LOC110117498-PIK3R3F6TDL0 507 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 H3BSH0 61 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 CHST1O43916 411 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 ZNF254O75437 659 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 PRKXP51817 358 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 UBE2E1P51965 193 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 RPS25P62851 125 aaKnown RBP6.96□□□□□ -1.3
SDF2-204ENST00000587338 ACSM1Q08AH1 577 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 ECH1Q13011 328 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 MALLQ13021 153 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 MRPL28Q13084 256 aaKnown RBP6.96□□□□□ -1.3
SDF2-204ENST00000587338 IKZF1Q13422 519 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 TPBGQ13641 420 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 ALKBH1Q13686 389 aaKnown RBP6.96□□□□□ -1.3
SDF2-204ENST00000587338 SSX1Q16384 188 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 PCK2Q16822 640 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 ODF4Q2M2E3 257 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 LRRC75BQ2VPJ9 315 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 TIMM50Q3ZCQ8 353 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 RPL22L1Q6P5R6 122 aaKnown RBP6.96□□□□□ -1.3
SDF2-204ENST00000587338 PGAP1Q75T13 922 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 MRPL21Q7Z2W9 205 aaKnown RBP6.96□□□□□ -1.3
SDF2-204ENST00000587338 ANKRD13BQ86YJ7 626 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 GCSAMQ8N6F7 178 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 Q8N7P7 452 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 ZNF485Q8NCK3 441 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 LY6G5BQ8NDX9 201 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 RAB2BQ8WUD1 216 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 H1FXQ92522 213 aaKnown RBP6.96□□□□□ -1.3
SDF2-204ENST00000587338 ISOC1Q96CN7 298 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 COQ7Q99807 217 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 FAM234AQ9H0X4 552 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 KAAG1Q9UBP8 84 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 ENPP5Q9UJA9 477 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 SSR3Q9UNL2 185 aa6.96□□□□□ -1.3
SDF2-204ENST00000587338 SIRT4Q9Y6E7 314 aaPredicted RBP6.96□□□□□ -1.3
SDF2-204ENST00000587338 TMEM269A0A1B0GVZ9 245 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 F5H5K5 113 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 OGG1O15527 345 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 GMDSO60547 372 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 PEX14O75381 377 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 LCATP04180 440 aa6.95□□□□□ -1.3
SDF2-204ENST00000587338 ANXA2P07355 339 aaKnown RBP6.95□□□□□ -1.3
SDF2-204ENST00000587338 ACSM4P0C7M7 580 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms