RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 ISYNA1Q9NPH2 558 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 MMP26Q9NRE1 261 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 OPN4Q9UHM6 478 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 RPUSD1Q9UJJ7 312 aaKnown RBP11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 NUP50Q9UKX7 468 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 ZFHX3Q15911 3703 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 SETD2Q9BYW2 2564 aaPredicted RBP11.46□□□□□ -0.58
PRKCSH-202ENST00000585540 C22orf46C9J442 243 aa11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 HCKP08631 526 aa11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 GABRA2P47869 451 aa11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 SOX2P48431 317 aa11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 PDZK1IP1Q13113 114 aa11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 SPHARQ15513 63 aa11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 TBCEQ15813 527 aaPredicted RBP11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 C1orf122Q6ZSJ8 110 aa11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 C9orf139Q6ZV77 190 aa11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 SLC25A26Q70HW3 274 aa11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 BTN2A1Q7KYR7 527 aa11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 LY6G5BQ8NDX9 201 aa11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 OR5D13Q8NGL4 314 aa11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 NPRL2Q8WTW4 380 aa11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 ZFAND2BQ8WV99 257 aa11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 GHSRQ92847 366 aa11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 YTHDF1Q9BYJ9 559 aaKnown RBP11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 CNTD2Q9H8S5 307 aa11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 SMURF1Q9HCE7 757 aa11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 PCDHB16Q9NRJ7 776 aa11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 FOXJ3Q9UPW0 622 aa11.45□□□□□ -0.58
PRKCSH-202ENST00000585540 IGKV1D-17A0A075B6S4 117 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 IGKV1-27A0A075B6S5 117 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 RFPL4AA6NLU0 287 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 RFPL4AL1F8VTS6 287 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 M0R1W7 72 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 TCF21O43680 179 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 KDM4BO94953 1096 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 CELP19835 753 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 AMY2BP19961 511 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 PSMA1P25786 263 aaKnown RBP11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 PRDX2P32119 198 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 RANBP1P43487 201 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 POU3F4P49335 361 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 BLMHQ13867 455 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 ZNF146Q15072 292 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 TRAM1Q15629 374 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 GPR157Q5UAW9 335 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 METAP1DQ6UB28 335 aaPredicted RBP11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 C1orf229Q6ZS94 237 aaPredicted RBP11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 IL17RELQ6ZVW7 336 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 PRIMA1Q86XR5 153 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 ANGPTL5Q86XS5 388 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 FAM216BQ8N7L0 139 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 EMG1Q92979 244 aaKnown RBP11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 ZMAT3Q9HA38 289 aaKnown RBP11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 TMEM138Q9NPI0 162 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 SNTG1Q9NSN8 517 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 LRRC42Q9Y546 428 aa11.44□□□□□ -0.58
PRKCSH-202ENST00000585540 ZNF780AO75290 641 aaPredicted RBP11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 PLATP00750 562 aa11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 AVPP01185 164 aa11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 MTNR1BP49286 362 aa11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 RPS11P62280 158 aaKnown RBP eCLIP11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 GUCA2AQ02747 115 aa11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 KISS1Q15726 138 aa11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 DGUOKQ16854 277 aa11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 ASPHD2Q6ICH7 369 aa11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 FAM58AQ8N1B3 248 aa11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 BPIFB2Q8N4F0 458 aa11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 NKAIN3Q8N8D7 197 aa11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 CHST4Q8NCG5 386 aa11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 TMEM185AQ8NFB2 350 aa11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 PHYHIPQ92561 330 aa11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 UFD1Q92890 307 aa11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 ORAI1Q96D31 301 aa11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 SNX22Q96L94 193 aa11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 WDFY2Q96P53 400 aa11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 ACOT13Q9NPJ3 140 aa11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 MTCH1Q9NZJ7 389 aa11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 MAB21L2Q9Y586 359 aa11.43□□□□□ -0.58
PRKCSH-202ENST00000585540 hCG_1809904A0A1W2PP81 198 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 A0A1W2PPE2 198 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 A0A1W2PR64 198 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 A0A1W2PRV1 198 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 FUOMA2VDF0 154 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 TOX4O94842 621 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 HSMCR30P0CW71 290 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 NDUFB7P17568 137 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 IGFBP3P17936 291 aaPredicted RBP11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 BDKRB2P30411 391 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 CAPZA1P52907 286 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 ZP1P60852 638 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 GMFBP60983 142 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 FGF12P61328 243 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 EMX1Q04741 257 aaPredicted RBP11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 IKZF1Q13422 519 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 GPR176Q14439 515 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 TUSC1Q2TAM9 212 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 KCTD21Q4G0X4 260 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 LIPKQ5VXJ0 399 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 NCR3LG1Q68D85 454 aa11.42□□□□□ -0.58
PRKCSH-202ENST00000585540 ELP2Q6IA86 826 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms