RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 IGHV4-31P0DP07 118 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 PSG2P11465 335 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 MUC1P15941 1255 aaPredicted RBP11.7□□□□□ -0.54
GGA3-216ENST00000583282 DUSP1P28562 367 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 PTGFRP43088 359 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 PITPNBP48739 271 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 ERVK11-1P61568 191 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 LMO4P61968 165 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 TIMM50Q3ZCQ8 353 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 SLC22A6Q4U2R8 563 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 FIP1L1Q6UN15 594 aaKnown RBP11.7□□□□□ -0.54
GGA3-216ENST00000583282 GLIPR1L1Q6UWM5 242 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 NLRC3Q7RTR2 1065 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 GPR141Q7Z602 305 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 Q8IYB0 196 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 FAM58AQ8N1B3 248 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 FGFRL1Q8N441 504 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 ZSCAN4Q8NAM6 433 aaPredicted RBP11.7□□□□□ -0.54
GGA3-216ENST00000583282 NEIL1Q96FI4 390 aaPredicted RBP11.7□□□□□ -0.54
GGA3-216ENST00000583282 GAFA1Q96PS6 74 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 SMR3AQ99954 134 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 PLGRKTQ9HBL7 147 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 MIOXQ9UGB7 285 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 METRNQ9UJH8 293 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 GSTK1Q9Y2Q3 226 aa11.7□□□□□ -0.54
GGA3-216ENST00000583282 CREBBPQ92793 2442 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 IGKV1D-17A0A075B6S4 117 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 A0A1W2PP11 408 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 MEGF11A6BM72 1044 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 PHF1O43189 567 aaPredicted RBP11.69□□□□□ -0.54
GGA3-216ENST00000583282 NOS1APO75052 506 aaPredicted RBP11.69□□□□□ -0.54
GGA3-216ENST00000583282 KNG1P01042 644 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 GALP22466 123 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 CAPZA1P52907 286 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 GNB2P62879 340 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 LCN2P80188 198 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 MXD1Q05195 221 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 P2RY14Q15391 338 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 ESCO2Q56NI9 601 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 HES5Q5TA89 166 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 SAXO1Q8IYX7 474 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 TMEM185AQ8NFB2 350 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 PXT1Q8NFP0 134 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 ANGPTL6Q8NI99 470 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 ST8SIA4Q92187 359 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 C12orf43Q96C57 262 aaKnown RBP11.69□□□□□ -0.54
GGA3-216ENST00000583282 KCTD7Q96MP8 289 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 TMUB1Q9BVT8 246 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 FUNDC2Q9BWH2 189 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 SSBP3Q9BWW4 388 aaPredicted RBP11.69□□□□□ -0.54
GGA3-216ENST00000583282 NAA50Q9GZZ1 169 aaKnown RBP11.69□□□□□ -0.54
GGA3-216ENST00000583282 METTL9Q9H1A3 318 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 RASL12Q9NYN1 266 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 SCOCQ9UIL1 159 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 ZNF222Q9UK12 451 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 VPS13CQ709C8 3753 aa11.69□□□□□ -0.54
GGA3-216ENST00000583282 YLPM1P49750 1951 aaKnown RBP11.68□□□□□ -0.54
GGA3-216ENST00000583282 SIRPB1O00241 398 aa11.68□□□□□ -0.54
GGA3-216ENST00000583282 PDCD5O14737 125 aa11.68□□□□□ -0.54
GGA3-216ENST00000583282 HAND1O96004 215 aa11.68□□□□□ -0.54
GGA3-216ENST00000583282 CSTBP04080 98 aaKnown RBP11.68□□□□□ -0.54
GGA3-216ENST00000583282 TFAP2AP05549 437 aa11.68□□□□□ -0.54
GGA3-216ENST00000583282 AMY2BP19961 511 aa11.68□□□□□ -0.54
GGA3-216ENST00000583282 RAB3BP20337 219 aa11.68□□□□□ -0.54
GGA3-216ENST00000583282 FGF9P31371 208 aaPredicted RBP11.68□□□□□ -0.54
GGA3-216ENST00000583282 ALDH3B2P48448 385 aa11.68□□□□□ -0.54
GGA3-216ENST00000583282 CLDN12P56749 244 aa11.68□□□□□ -0.54
GGA3-216ENST00000583282 RAB11BQ15907 218 aa11.68□□□□□ -0.54
GGA3-216ENST00000583282 PIGYQ3MUY2 71 aa11.68□□□□□ -0.54
GGA3-216ENST00000583282 GPR107Q5VW38 600 aa11.68□□□□□ -0.54
GGA3-216ENST00000583282 METAP1DQ6UB28 335 aaPredicted RBP11.68□□□□□ -0.54
GGA3-216ENST00000583282 SLC36A1Q7Z2H8 476 aa11.68□□□□□ -0.54
GGA3-216ENST00000583282 CD177Q8N6Q3 437 aa11.68□□□□□ -0.54
GGA3-216ENST00000583282 ASCC1Q8N9N2 400 aaKnown RBP11.68□□□□□ -0.54
GGA3-216ENST00000583282 FAM46BQ96A09 425 aa11.68□□□□□ -0.54
GGA3-216ENST00000583282 UQCC2Q9BRT2 126 aa11.68□□□□□ -0.54
GGA3-216ENST00000583282 HMG20AQ9NP66 347 aa11.68□□□□□ -0.54
GGA3-216ENST00000583282 CLN8Q9UBY8 286 aa11.68□□□□□ -0.54
GGA3-216ENST00000583282 OTOGQ6ZRI0 2925 aa11.67□□□□□ -0.54
GGA3-216ENST00000583282 FLNAP21333 2647 aaKnown RBP11.67□□□□□ -0.54
GGA3-216ENST00000583282 ZNF469Q96JG9 3925 aaPredicted RBP11.67□□□□□ -0.54
GGA3-216ENST00000583282 TRAV1-2A0A0B4J238 106 aa11.67□□□□□ -0.54
GGA3-216ENST00000583282 HSPB6O14558 160 aa11.67□□□□□ -0.54
GGA3-216ENST00000583282 DVL1O14640 695 aa11.67□□□□□ -0.54
GGA3-216ENST00000583282 CRTAPO75718 401 aaPredicted RBP11.67□□□□□ -0.54
GGA3-216ENST00000583282 FSTL3O95633 263 aa11.67□□□□□ -0.54
GGA3-216ENST00000583282 WNT2P09544 360 aa11.67□□□□□ -0.54
GGA3-216ENST00000583282 CLEC2LP0C7M8 214 aa11.67□□□□□ -0.54
GGA3-216ENST00000583282 ZNF44P15621 663 aa11.67□□□□□ -0.54
GGA3-216ENST00000583282 HTR2CP28335 458 aa11.67□□□□□ -0.54
GGA3-216ENST00000583282 SDC2P34741 201 aa11.67□□□□□ -0.54
GGA3-216ENST00000583282 MTNR1BP49286 362 aa11.67□□□□□ -0.54
GGA3-216ENST00000583282 GZMKP49863 264 aa11.67□□□□□ -0.54
GGA3-216ENST00000583282 CAV3P56539 151 aa11.67□□□□□ -0.54
GGA3-216ENST00000583282 FGF12P61328 243 aa11.67□□□□□ -0.54
GGA3-216ENST00000583282 NCS1P62166 190 aa11.67□□□□□ -0.54
GGA3-216ENST00000583282 IL13RA1P78552 427 aa11.67□□□□□ -0.54
GGA3-216ENST00000583282 COL10A1Q03692 680 aa11.67□□□□□ -0.54
GGA3-216ENST00000583282 KRTAP1-1Q07627 177 aa11.67□□□□□ -0.54
GGA3-216ENST00000583282 PDCD1Q15116 288 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms