RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 PSMD7P51665 324 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 BMXP51813 675 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 RSU1Q15404 277 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 ESCO2Q56NI9 601 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 AWAT2Q6E213 333 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 LYPD2Q6UXB3 125 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 GDPGP1Q6ZNW5 385 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 C1QL2Q7Z5L3 287 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 LYPD6Q86Y78 171 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 OR13F1Q8NGS4 319 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 ANGPTL6Q8NI99 470 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 KCTD7Q96MP8 289 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 CCL13Q99616 98 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 PCDHB16Q9NRJ7 776 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 MRPS28Q9Y2Q9 187 aaKnown RBP11.67□□□□□ -0.54
RPAIN-217ENST00000575711 CREBBPQ92793 2442 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 IGKV1D-17A0A075B6S4 117 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 B4DSR2 109 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 FAM157AC9JC47 383 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 AIREO43918 545 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 ZNF780AO75290 641 aaPredicted RBP11.66□□□□□ -0.54
RPAIN-217ENST00000575711 FOXH1O75593 365 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 CDRT1O95170 752 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 HTR3BO95264 441 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 CSTBP04080 98 aaKnown RBP11.66□□□□□ -0.54
RPAIN-217ENST00000575711 TFAP2AP05549 437 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 IGHV4-31P0DP07 118 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 CALCBP10092 127 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 ALDH3B2P48448 385 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 PITPNBP48739 271 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 MTNR1BP49286 362 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 FGF12P61328 243 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 GNB2P62879 340 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 GPR176Q14439 515 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 SPIN3Q5JUX0 258 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 ATPAF1Q5TC12 328 aaPredicted RBP11.66□□□□□ -0.54
RPAIN-217ENST00000575711 GLIPR1L1Q6UWM5 242 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 ASCL4Q6XD76 172 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 ZNF788Q6ZQV5 615 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 LINC01356Q8N9X3 169 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 OR4D6Q8NGJ1 314 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 C1orf159Q96HA4 380 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 SSBP3Q9BWW4 388 aaPredicted RBP11.66□□□□□ -0.54
RPAIN-217ENST00000575711 PLGRKTQ9HBL7 147 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 HMG20AQ9NP66 347 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 IL36GQ9NZH8 169 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 KAAG1Q9UBP8 84 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 CLN8Q9UBY8 286 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 OR14J1Q9UGF5 321 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 GLS2Q9UI32 602 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 SCOCQ9UIL1 159 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 ZNF222Q9UK12 451 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 V9GY05 133 aa11.66□□□□□ -0.54
RPAIN-217ENST00000575711 SHISA3A0PJX4 238 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 AMY2BP19961 511 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 RAB3BP20337 219 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 SERPINA2P20848 420 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 HTR2CP28335 458 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 PRDX2P32119 198 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 RANBP1P43487 201 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 NPY4RP50391 375 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 SNU13P55769 128 aaKnown RBP11.65□□□□□ -0.54
RPAIN-217ENST00000575711 SEC61A1P61619 476 aaKnown RBP11.65□□□□□ -0.54
RPAIN-217ENST00000575711 IL13RA1P78552 427 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 SLC22A6Q4U2R8 563 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 C1orf100Q5SVJ3 147 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 CYB5R2Q6BCY4 276 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 ELP2Q6IA86 826 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 GPR141Q7Z602 305 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 FAM216BQ8N7L0 139 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 OR6M1Q8NGM8 313 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 OR10K1Q8NGX5 313 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 TBC1D15Q8TC07 691 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 MED30Q96HR3 178 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 GAFA1Q96PS6 74 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 CENPOQ9BU64 300 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 FUNDC2Q9BWH2 189 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 LPAR2Q9HBW0 351 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 CTSZQ9UBR2 303 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 GHRLQ9UBU3 117 aa11.65□□□□□ -0.54
RPAIN-217ENST00000575711 A8MXK9 166 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 SLC17A2O00624 439 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 SLC22A1O15245 554 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 SIGLEC5O15389 551 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 NDUFB3O43676 98 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 HAND1O96004 215 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 TFF1P04155 84 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 MSMBP08118 114 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 CHRM2P08172 466 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 UBBP0CG47 229 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 CD37P11049 281 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 CEBPDP49716 269 aaPredicted RBP11.64□□□□□ -0.55
RPAIN-217ENST00000575711 LCN2P80188 198 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 IKZF1Q13422 519 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 ZNF146Q15072 292 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 DGUOKQ16854 277 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 LRRC10Q5BKY1 277 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 WDR25Q64LD2 544 aaPredicted RBP11.64□□□□□ -0.55
RPAIN-217ENST00000575711 ZNF841Q6ZN19 808 aa11.64□□□□□ -0.55
RPAIN-217ENST00000575711 BIVMQ86UB2 503 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms