RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 OR2AT4A6NND4 320 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 F8VVB4 439 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 F8VWA3 439 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 CDRT1O95170 752 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 CSTBP04080 98 aaKnown RBP14.29□□□□□ -0.12
NUP88-210ENST00000574867 HEXAP06865 529 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 CAPZA1P52907 286 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 TMBIM6P55061 237 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 LOXL1Q08397 574 aaPredicted RBP14.29□□□□□ -0.12
NUP88-210ENST00000574867 RAB11BQ15907 218 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 CTF1Q16619 201 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 SPIN3Q5JUX0 258 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 FAM166AQ6J272 317 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 SPNS3Q6ZMD2 512 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 RAB39BQ96DA2 213 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 HMG20AQ9NP66 347 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 PCDHB10Q9UN67 800 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 NKX6-3A6NJ46 265 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 IFITM5A6NNB3 132 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 CEACAM18A8MTB9 384 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 NOTOA8MTQ0 251 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 RNF223E7ERA6 249 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 AIPO00170 330 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 NOL3O60936 208 aaKnown RBP14.29□□□□□ -0.12
NUP88-210ENST00000574867 PRKACAP17612 351 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 OR10A3P58181 314 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 FGF12P61328 243 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 NCS1P62166 190 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 BLMHQ13867 455 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 CLDND2Q8NHS1 167 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 SEH1LQ96EE3 360 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 CST11Q9H112 138 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 NARFLQ9H6Q4 476 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 MIOXQ9UGB7 285 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 STEAP1Q9UHE8 339 aa14.29□□□□□ -0.12
NUP88-210ENST00000574867 BPNT1O95861 308 aa14.28□□□□□ -0.12
NUP88-210ENST00000574867 IL1AP01583 271 aa14.28□□□□□ -0.12
NUP88-210ENST00000574867 GYPAP02724 150 aa14.28□□□□□ -0.12
NUP88-210ENST00000574867 VBP1P61758 197 aa14.28□□□□□ -0.12
NUP88-210ENST00000574867 SLC22A6Q4U2R8 563 aa14.28□□□□□ -0.12
NUP88-210ENST00000574867 ATPAF1Q5TC12 328 aaPredicted RBP14.28□□□□□ -0.12
NUP88-210ENST00000574867 NLRC3Q7RTR2 1065 aa14.28□□□□□ -0.12
NUP88-210ENST00000574867 NR2C2APQ86WQ0 139 aa14.28□□□□□ -0.12
NUP88-210ENST00000574867 ANGPTL6Q8NI99 470 aa14.28□□□□□ -0.12
NUP88-210ENST00000574867 C1orf147Q96MC9 270 aaPredicted RBP14.28□□□□□ -0.12
NUP88-210ENST00000574867 KAAG1Q9UBP8 84 aa14.28□□□□□ -0.12
NUP88-210ENST00000574867 A0A0G2JK05 382 aa14.27□□□□□ -0.12
NUP88-210ENST00000574867 HTR3BO95264 441 aa14.27□□□□□ -0.12
NUP88-210ENST00000574867 IGHV2-5P01817 119 aa14.27□□□□□ -0.12
NUP88-210ENST00000574867 PSG2P11465 335 aa14.27□□□□□ -0.12
NUP88-210ENST00000574867 RPS2P15880 293 aaKnown RBP14.27□□□□□ -0.12
NUP88-210ENST00000574867 SERPINA2P20848 420 aa14.27□□□□□ -0.12
NUP88-210ENST00000574867 TGFBR1P36897 503 aa14.27□□□□□ -0.12
NUP88-210ENST00000574867 MXD1Q05195 221 aa14.27□□□□□ -0.12
NUP88-210ENST00000574867 SLC36A1Q7Z2H8 476 aa14.27□□□□□ -0.12
NUP88-210ENST00000574867 CROCCP3Q8IVE0 287 aa14.27□□□□□ -0.12
NUP88-210ENST00000574867 SLC25A28Q96A46 364 aa14.27□□□□□ -0.12
NUP88-210ENST00000574867 MRPS24Q96EL2 167 aaKnown RBP14.27□□□□□ -0.12
NUP88-210ENST00000574867 ZNF665Q9H7R5 613 aa14.27□□□□□ -0.12
NUP88-210ENST00000574867 SEBOXQ9HB31 216 aaPredicted RBP14.27□□□□□ -0.12
NUP88-210ENST00000574867 PATZ1Q9HBE1 687 aaKnown RBP14.27□□□□□ -0.12
NUP88-210ENST00000574867 GLS2Q9UI32 602 aa14.27□□□□□ -0.12
NUP88-210ENST00000574867 ZNF222Q9UK12 451 aa14.27□□□□□ -0.12
NUP88-210ENST00000574867 IGKV1D-17A0A075B6S4 117 aa14.27□□□□□ -0.13
NUP88-210ENST00000574867 TNFRSF13BO14836 293 aaPredicted RBP14.27□□□□□ -0.13
NUP88-210ENST00000574867 TMEM127O75204 238 aa14.27□□□□□ -0.13
NUP88-210ENST00000574867 GTF2F2P13984 249 aa14.27□□□□□ -0.13
NUP88-210ENST00000574867 ARSBP15848 533 aa14.27□□□□□ -0.13
NUP88-210ENST00000574867 ZNF146Q15072 292 aa14.27□□□□□ -0.13
NUP88-210ENST00000574867 NHLRC3Q5JS37 347 aa14.27□□□□□ -0.13
NUP88-210ENST00000574867 SFXN4Q6P4A7 337 aa14.27□□□□□ -0.13
NUP88-210ENST00000574867 USP43Q70EL4 1123 aa14.27□□□□□ -0.13
NUP88-210ENST00000574867 OR51T1Q8NGJ9 327 aa14.27□□□□□ -0.13
NUP88-210ENST00000574867 OR10K1Q8NGX5 313 aa14.27□□□□□ -0.13
NUP88-210ENST00000574867 CREBBPQ92793 2442 aa14.27□□□□□ -0.13
NUP88-210ENST00000574867 ITPR3Q14573 2671 aa14.27□□□□□ -0.13
NUP88-210ENST00000574867 SMIM30A4D0T7 59 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 RFPL4AA6NLU0 287 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 F5H0A9 414 aaPredicted RBP14.26□□□□□ -0.13
NUP88-210ENST00000574867 RFPL4AL1F8VTS6 287 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 ADAM20O43506 726 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 SERPINB10P48595 397 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 IL13RA2Q14627 380 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 HES5Q5TA89 166 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 ZNF788Q6ZQV5 615 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 OSR2Q8N2R0 312 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 OR5T2Q8NGG2 359 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 OR8B3Q8NGG8 313 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 NEIL1Q96FI4 390 aaPredicted RBP14.26□□□□□ -0.13
NUP88-210ENST00000574867 OR8B2Q96RD0 313 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 TEX15Q9BXT5 2789 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 TMPRSS2O15393 492 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 CLEC2LP0C7M8 214 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 LMO4P61968 165 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 P2RY14Q15391 338 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 OR2W3Q7Z3T1 314 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 LINC00596Q86U02 117 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 KCNG3Q8TAE7 436 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 SDSLQ96GA7 329 aa14.26□□□□□ -0.13
NUP88-210ENST00000574867 MED30Q96HR3 178 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms