RNA–Protein interactions for RNA: ENST00000568444.1

KLHDC4-222, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-222	ENST00000568444	ERVK11-1	P61568	191 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	ZMYND11	Q15326	602 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	KCNJ8	Q15842	424 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	DGUOK	Q16854	277 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	FAM166A	Q6J272	317 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	ASCL4	Q6XD76	172 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	CROCCP3	Q8IVE0	287 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	OSR2	Q8N2R0	312 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	OR51D1	Q8NGF3	324 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	FAM46B	Q96A09	425 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	SLC25A46	Q96AG3	418 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	FAM3D	Q96BQ1	224 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	FOXC2	Q99958	501 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	CST11	Q9H112	138 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	RHOF	Q9HBH0	211 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	HMG20A	Q9NP66	347 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	IL36G	Q9NZH8	169 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	IL36RN	Q9UBH0	155 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	OR14J1	Q9UGF5	321 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	IGHV4-30-2	A0A087WSY4	118 aa		11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	ZNF701	M0R085	212 aa	Predicted RBP	11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	MPIG6B	O95866	241 aa		11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	GYPA	P02724	150 aa		11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	GTF2F2	P13984	249 aa		11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	MUC1	P15941	1255 aa	Predicted RBP	11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	GIF	P27352	417 aa		11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	SOX6	P35712	828 aa		11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	MDH2	P40926	338 aa	Known RBP	11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	GABRA2	P47869	451 aa		11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	RORC	P51449	518 aa		11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	FGF12	P61328	243 aa		11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	SHE	Q5VZ18	495 aa		11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	TEX36	Q5VZQ5	186 aa		11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	OR10K2	Q6IF99	312 aa		11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	FAM90A1	Q86YD7	464 aa		11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	MUC20	Q8N307	709 aa	Predicted RBP	11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	OR5T2	Q8NGG2	359 aa		11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	SLC25A28	Q96A46	364 aa		11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444		Q96MF0	132 aa		11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	GAL3ST1	Q99999	423 aa		11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	BANF2	Q9H503	90 aa		11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	HES4	Q9HCC6	221 aa		11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	BATF3	Q9NR55	127 aa		11.96	□□□□□ -0.49
KLHDC4-222	ENST00000568444	PDZD2	O15018	2839 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	NKX6-3	A6NJ46	265 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	OR2AT4	A6NND4	320 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	KNG1	P01042	644 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	TFF1	P04155	84 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	VSIG8	P0DPA2	414 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	PSG2	P11465	335 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	SNRPB	P14678	240 aa	Known RBP	11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	MGMT	P16455	207 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	CFP	P27918	469 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	DUSP1	P28562	367 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	NR4A2	P43354	598 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	CEBPD	P49716	269 aa	Predicted RBP	11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	CAPZA1	P52907	286 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	C2orf76	Q3KRA6	126 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	PIGY	Q3MUY2	71 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	ZNF404	Q494X3	552 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	FOXB2	Q5VYV0	432 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	ELP2	Q6IA86	826 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	PRSS57	Q6UWY2	283 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	SPIC	Q8N5J4	248 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	TMEM104	Q8NE00	496 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	KCNG3	Q8TAE7	436 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	LGALS14	Q8TCE9	139 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	DGCR14	Q96DF8	476 aa	Known RBP	11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	C1orf147	Q96MC9	270 aa	Predicted RBP	11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	TMEM246	Q9BRR3	403 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	DCUN1D5	Q9BTE7	237 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	TMEM59	Q9BXS4	323 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	BARHL1	Q9BZE3	327 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	SELENOI	Q9C0D9	397 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	TMEM165	Q9HC07	324 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	GLS2	Q9UI32	602 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	PCDHB10	Q9UN67	800 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	ST3GAL6	Q9Y274	331 aa		11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	ANKRD17	O75179	2603 aa	Known RBP	11.95	□□□□□ -0.5
KLHDC4-222	ENST00000568444	USF3	Q68DE3	2245 aa		11.94	□□□□□ -0.5
KLHDC4-222	ENST00000568444	TMEM272	A0A1B0GTI8	110 aa		11.94	□□□□□ -0.5
KLHDC4-222	ENST00000568444	RFPL4A	A6NLU0	287 aa		11.94	□□□□□ -0.5
KLHDC4-222	ENST00000568444	RFPL4AL1	F8VTS6	287 aa		11.94	□□□□□ -0.5
KLHDC4-222	ENST00000568444	PAH	P00439	452 aa		11.94	□□□□□ -0.5
KLHDC4-222	ENST00000568444	SLC25A16	P16260	332 aa		11.94	□□□□□ -0.5
KLHDC4-222	ENST00000568444	GABRR1	P24046	479 aa		11.94	□□□□□ -0.5
KLHDC4-222	ENST00000568444	RBM11	P57052	281 aa	Known RBP	11.94	□□□□□ -0.5
KLHDC4-222	ENST00000568444	SCN1B	Q07699	218 aa		11.94	□□□□□ -0.5
KLHDC4-222	ENST00000568444	IKZF1	Q13422	519 aa		11.94	□□□□□ -0.5
KLHDC4-222	ENST00000568444	UNC119	Q13432	240 aa		11.94	□□□□□ -0.5
KLHDC4-222	ENST00000568444	SPIN3	Q5JUX0	258 aa		11.94	□□□□□ -0.5
KLHDC4-222	ENST00000568444	STUM	Q69YW2	141 aa		11.94	□□□□□ -0.5
KLHDC4-222	ENST00000568444	DNM1P46	Q6ZS02	220 aa		11.94	□□□□□ -0.5
KLHDC4-222	ENST00000568444	OR2W3	Q7Z3T1	314 aa		11.94	□□□□□ -0.5
KLHDC4-222	ENST00000568444	LRRC28	Q86X40	367 aa	Predicted RBP	11.94	□□□□□ -0.5
KLHDC4-222	ENST00000568444	DYNC2LI1	Q8TCX1	351 aa		11.94	□□□□□ -0.5
KLHDC4-222	ENST00000568444	OR5V1	Q9UGF6	321 aa		11.94	□□□□□ -0.5
KLHDC4-222	ENST00000568444	VPS13C	Q709C8	3753 aa		11.94	□□□□□ -0.5
KLHDC4-222	ENST00000568444	ABCA12	Q86UK0	2595 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms